Transcript Information: R_Transcript_171486.p1


Annotated TAIR IDAT5G50915.1
Annotated Gene Namebasic helix-loop-helix (bHLH) DNA-binding superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:20710764-20712252 | Reverse length=286
E-Value2.8E-49
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.95816068003773
Replicate 20.99195120076999
Replicate 31.3226987588329
Condition 2: 8 Hour
Replicate 11.478149327524
Replicate 22.0541492505026
Replicate 31.3816186561449
Condition 3: 24 Hour
Replicate 11.144877525791
Replicate 20.75254164193571
Replicate 30.91916870076209


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_171486.p1 GENE.R_Transcript_171486~~R_Transcript_171486.p1 ORF type:complete len:381 (+),score=87.49,HLH|PF00010.22|1.5e-05 R_Transcript_171486:123-1145(+)
ATGGCAGCTTTTTCATACCAGGACCCTCCTTTCATTGTTGAGTCTGTTAATTATTTACCCATCAAAAGCCCTGTTCTTCTGGCTCATCATAATGATGGTGAATTCTACCCCAACATGAATCATCAAGTTGAATTTGGTGATGCCAGTACTCCTCATGAAAGCAGCTGTGTTGAGCAGCAAAGTATTCATAATAATAATTCTCAGAATGAGCCGCCTTCAGTGACTCAAAACCAGAGAACTGACCAAAGCTTCATATCAATGGTGGATAAAGCTGATAGTGGTGAGCAAGTGTCTCAGAATTCTTCACTTCATAACAAGAGGAAATCTAGATATGGATCTTCCCCTAATTCTGCTACTTCCAAGGATGTGAGACAAGTGAAGTGCAAGAAGCAGAAAAGAGAGAAAGAAGGAACCAAGGTTGAGAAAATTGACAAAAAGGATGAAAATGAAGAACCACCAAAAGGGTACATTCATGTGAGAGCAAGAAGGGGTCAAGCCACTGATAGCCACAGCCTTGCTGAAAGGGTAAGGAGAGAGAAAATCAGTGCAAGGATGAAAATGTTACAAGCTCTGGTTCCTGGTTGTGACAAGGTTACCGGGAAGGCCCTCATGTTGGATGAAATTATCAATTACGTCCAATCCTTGCAAAATCAAGTAGAGTTCTTGTCAATGAAGCTTGCTTCTTTGGACCCGATGGTCTACACCTTTGGACTAATGGATCTTGATCTGATGACATTCGGAACAGAGGGGATGAGCAATAGCATGGCATTACCAATGCCACTAATTCAATCCACCACCACCAGCAGCAGCGGCGGAACTAATCAGCCCATCGCTTTTGCCGACACAAACACAATAACCAGTGCCATCACCACTACTAGCACCGCCATCACCTCCACGGCCACCACCTTCCCTAGCCCTCTTCTCGATAGCTCGCCATGCAGCTTGTTGCCACAAGACCAAAAGCCAACAATTCTTCCTCTCCAGGATGGTAGAAGTTTATTTTGGAGAGTGGATGAGCAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_171486.p1 GENE.R_Transcript_171486~~R_Transcript_171486.p1 ORF type:complete len:381 (+),score=87.49,HLH|PF00010.22|1.5e-05 R_Transcript_171486:123-1145(+)
MAAFSYQDPPFIVESVNYLPIKSPVLLAHHNDGEFYPNMNHQVEFGDASTPHESSCVEQQSIHNNNSQNEPPSVTQNQRTDQSFISMVDKADSGEQVSQNSSLHNKRKSRYGSSPNSATSKDVRQVKCKKQKREKEGTKVEKIDKKDENEEPPKGYIHVRARRGQATDSHSLAERVRREKISARMKMLQALVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLASLDPMVYTFGLMDLDLMTFGTEGMSNSMALPMPLIQSTTTSSSGGTNQPIAFADTNTITSAITTTSTAITSTATTFPSPLLDSSPCSLLPQDQKPTILPLQDGRSLFWRVDEQ*

Click here to download the sequence:
Link to NCBI Protein BLAST