Transcript Information: R_Transcript_171530.p2


Annotated TAIR IDAT3G06350.1
Annotated Gene Namedehydroquinate dehydratase, putative / shikimate dehydrogenase, putative
Annotated Gene Symbol(s)EMB3004, MEE32
Annotation TypeOrtholog
Chromosome Positionchr3:1924536-1927701 | Reverse length=603
E-Value8.7E-59
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.0847534088145
Replicate 25.5490222528788
Replicate 34.7449670734887
Condition 2: 8 Hour
Replicate 13.6728797420868
Replicate 25.1110587065567
Replicate 32.4634328699097
Condition 3: 24 Hour
Replicate 14.4275771082001
Replicate 22.0479883255536
Replicate 32.9704742075075


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_171530.p2 GENE.R_Transcript_171530~~R_Transcript_171530.p2 ORF type:complete len:140 (+),score=24.85 R_Transcript_171530:1307-1726(+)
ATGGCACTTGCTTATGGAGCAAAAGCCAAAGGGGCTAGGGTGGTCATCGCCAATCACACTCTCGAAAAGGGTGTGGATTTAGCAAATAAAGTGGGTGGAAAAGCTATCCATTTTGATGAACTAATTGACTTTGCTCCAGAAGATGGAATGGTTTTAGCAAATGCTACACCTGTTGTAATGAAACCAAATACTGACCATACACCTATTTCTAAGGAAGCTCTGAAGCGTTACGCTCTTGTTTTTGATGCTATATATACACCAAAGTTAACAAGGCTCTTGAGAGAAGCTCGGGAATCAGGAGTCACAGTTGCGTTTGGAACTGAAATGTTTATAAGACAAGCATTCATACAGTTTGAAAAGTTCACTGGCTTGCCAGCGCCAAAAGAGCTCATGCGCAGAGTGTTGGAGAGGAATACGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_171530.p2 GENE.R_Transcript_171530~~R_Transcript_171530.p2 ORF type:complete len:140 (+),score=24.85 R_Transcript_171530:1307-1726(+)
MALAYGAKAKGARVVIANHTLEKGVDLANKVGGKAIHFDELIDFAPEDGMVLANATPVVMKPNTDHTPISKEALKRYALVFDAIYTPKLTRLLREARESGVTVAFGTEMFIRQAFIQFEKFTGLPAPKELMRRVLERNT*

Click here to download the sequence:
Link to NCBI Protein BLAST