Transcript Information: R_Transcript_171533.p1


Annotated TAIR IDAT3G06350.1
Annotated Gene Namedehydroquinate dehydratase, putative / shikimate dehydrogenase, putative
Annotated Gene Symbol(s)EMB3004, MEE32
Annotation TypeOrtholog
Chromosome Positionchr3:1924536-1927701 | Reverse length=603
E-Value2.1E-118
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.3401231993229
Replicate 22.0765571840295
Replicate 33.2723910851646
Condition 2: 8 Hour
Replicate 11.883528072865
Replicate 21.9657918102141
Replicate 31.7287248209892
Condition 3: 24 Hour
Replicate 12.6910250230276
Replicate 20.88867343515147
Replicate 31.5233201064141


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_171533.p1 GENE.R_Transcript_171533~~R_Transcript_171533.p1 ORF type:complete len:273 (+),score=59.80,DHquinase_I|PF01487.11|1.8e-26,Shikimate_dh_N|PF08501.7|3.6e-21 R_Transcript_171533:765-1583(+)
ATGAAATCACCCCCTTCTGTGGAAGAGATAGGCATCCTGGTGGCAAGAATTCAAGCAACTGGAGCTGACATAGTCAAGATTGCAACTACTGCGCTAGACATTACAGATTGTGCGCGTATTTTGCAACTACTCCCACATTCTCAGGTTCCAATGATTGGACTGGTTATGGGTGAAAAGGGAGCGATATCAAGGATACTTCGTGCTAAATTTGGTGGATTTCTTACATTTGGGACACTTGAAGGTGGAGCAGTATCAACTCCTGGACAACCTACTGTCAAAGATCTGCTAAATTTGTATAACTTCAGACTGATAGGGCCTGATACCAAAGTTCATGGAGTTATTGGGAATCCAGTCGGTCATAGCAGGAGTCCCCATTTGTATAATCCTGCCTTCAAGTCTGTTGGCTTTGATGGAATCTACTTGCATTTCTTGGTGGATAGTGTGCCTAAGTTTCTTGACACATATTCTTCTCCTGATTTTGTTGGATACAGTTATGCAATTCCTCACAAGATGGCTGGACTTGCATGCTGCGATGAAGTGGATCCAACTGCAAAGGCAATTGGAGCCATAAATTGCATGATAAAGAGGCCAACTGATGGGAAACTATTAGGTTATAACTCTGATTACATGGGAGCTATTGAAGAAGGGTTAGAAGGTGTAAATGGTGAAAGCCCTGAATTAGGGTCACCCTTGGCTGGCAAACTATTCGTTGTCGTTGGAGCTGGTGGTGCAGCAATGGCACTTGCTTATGGAGCAAAAGCCAAAGGGGCTAGGGTGGTCATCGCCAATCACACTCTCGGTGCTAATTCTCTTGTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_171533.p1 GENE.R_Transcript_171533~~R_Transcript_171533.p1 ORF type:complete len:273 (+),score=59.80,DHquinase_I|PF01487.11|1.8e-26,Shikimate_dh_N|PF08501.7|3.6e-21 R_Transcript_171533:765-1583(+)
MKSPPSVEEIGILVARIQATGADIVKIATTALDITDCARILQLLPHSQVPMIGLVMGEKGAISRILRAKFGGFLTFGTLEGGAVSTPGQPTVKDLLNLYNFRLIGPDTKVHGVIGNPVGHSRSPHLYNPAFKSVGFDGIYLHFLVDSVPKFLDTYSSPDFVGYSYAIPHKMAGLACCDEVDPTAKAIGAINCMIKRPTDGKLLGYNSDYMGAIEEGLEGVNGESPELGSPLAGKLFVVVGAGGAAMALAYGAKAKGARVVIANHTLGANSLV*

Click here to download the sequence:
Link to NCBI Protein BLAST