Transcript Information: R_Transcript_171541.p1


Annotated TAIR IDAT3G53270.1
Annotated Gene NameSmall nuclear RNA activating complex (SNAPc), subunit SNAP43 protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:19750406-19752168 | Reverse length=280
E-Value0.0001
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.51210488820239
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.18664883924963
Replicate 20.53793314367262
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_171541.p1 GENE.R_Transcript_171541~~R_Transcript_171541.p1 ORF type:5prime_partial len:123 (+),score=36.26 R_Transcript_171541:3-371(+)
ACTGAGATTGAGCAGTTCCTTCACATGGACATGGGCATGGAACTTGACCTGAAGGTGCTCCAGAATATGTCTACAGAATATGAGGCAACTAAGAGTCTTGCTGTCAGAGTTGACAACCCAATCCCCCAAGTGGCTCCTCAAACTGTCGGGAGAAGAAGAGCTACTGGGAGTCGTGGCAGTAGAGGTACAAGCAATGGAAGATCAGGGAATGGTGATGGTGTTCATATGAATAATTTCAAATGCATATCAGTGAAGGATGCCATAATTGAGGGGTATGAAGCTGAAATCAGAAGATTCCATGAGCAAACTGAGAAGCTGCAAGATGAAATCGAACGAGCAAAAATGTTGACTGCGTCAGCTTTAGAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_171541.p1 GENE.R_Transcript_171541~~R_Transcript_171541.p1 ORF type:5prime_partial len:123 (+),score=36.26 R_Transcript_171541:3-371(+)
TEIEQFLHMDMGMELDLKVLQNMSTEYEATKSLAVRVDNPIPQVAPQTVGRRRATGSRGSRGTSNGRSGNGDGVHMNNFKCISVKDAIIEGYEAEIRRFHEQTEKLQDEIERAKMLTASALE*

Click here to download the sequence:
Link to NCBI Protein BLAST