Transcript Information: R_Transcript_17159.p3


Annotated TAIR IDAT4G38350.2
Annotated Gene NamePatched family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:17958324-17966846 | Reverse length=1297
E-Value1.6E-46
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.007990118324
Replicate 212.831072476627
Replicate 38.1446178119653
Condition 2: 8 Hour
Replicate 115.779779632669
Replicate 220.373247899747
Replicate 315.328026746105
Condition 3: 24 Hour
Replicate 116.580638553342
Replicate 214.458447494934
Replicate 314.834999843341


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_17159.p3 GENE.R_Transcript_17159~~R_Transcript_17159.p3 ORF type:3prime_partial len:90 (+),score=14.18,Patched|PF02460.14|5.7e-16 R_Transcript_17159:2120-2386(+)
ATGATTGTGGTGGATCTAATGGGTGTCATGGCAATCTTGGATATTCAACTCAATGCGGTTTCTGTTGTCAACCTTATCATGTCAATAGGGATTGCTGTGGAGTTTTGTGTGCATATAACGCACGCGTTTTCGGTCAGCCATGGGGATAGGAACCAGCGAACAAAGGAGGCTCTTGGTACCATGGGGGCTTCGGTTTTCAGCGGAATCACACTAACGAAGTTGGTTGGAGTTATTGTCCTTGCATTTGCTAAATCAGAGATCTTTGTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_17159.p3 GENE.R_Transcript_17159~~R_Transcript_17159.p3 ORF type:3prime_partial len:90 (+),score=14.18,Patched|PF02460.14|5.7e-16 R_Transcript_17159:2120-2386(+)
MIVVDLMGVMAILDIQLNAVSVVNLIMSIGIAVEFCVHITHAFSVSHGDRNQRTKEALGTMGASVFSGITLTKLVGVIVLAFAKSEIFV

Click here to download the sequence:
Link to NCBI Protein BLAST