Transcript Information: R_Transcript_171855.p1


Annotated TAIR IDAT5G10380.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)RING1, ATRING1
Annotation TypeOrtholog
Chromosome Positionchr5:3267819-3268724 | Forward length=301
E-Value1.4E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1880625473486
Replicate 20.99390771201411
Replicate 30.81325695607642
Condition 2: 8 Hour
Replicate 13.9119429205658
Replicate 26.4833326048408
Replicate 34.4036451800939
Condition 3: 24 Hour
Replicate 11.2226051186351
Replicate 21.3050449047679
Replicate 30.7770782729076


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_171855.p1 GENE.R_Transcript_171855~~R_Transcript_171855.p1 ORF type:complete len:169 (+),score=36.08,zf-RING_2|PF13639.2|1.1e+04,zf-RING_2|PF13639.2|2.4e-14,zf-RING_11|PF17123.1|3.9e-09,zf-RING_11|PF17123.1|5.1e+03,zf-rbx1|PF12678.3|2.3e-07,zf-C3HC4|PF00097.21|2e-07,zf-C3HC4_2|PF13923.2|1.9e-06 R_Transcript_171855:313-819(+)
ATGGGAGATTCATCAAGTGAGGCATTAGCACCTGAATCATTACAACAGTATCAGCAGCAATCACAGCAGTTCAACCTGGCCATGCTGTACTATGGCTTCTTTGTGATTGCAACAGCAGCCATAGTCCTGGCTATTTACCACTGTCTCATCATCAAATGGTTTGCTGAGGCCAGCAGTACTAGCCGGTCGTCGTGGGACACACCTGGAAGAGGTGGGCCCACCACTGCTCGGGCTCGGAAAATCGTCCAGCTGGCATCTAGTAAGTACTGCAAGAAGACTAGTCAGGATGGTCATGAAGAGTGTGTAGTTTGCTTGTCTCTGTTTGAAGAAGGGGAAGATATCAGAGAGCTTCCTGCATGTAAACACTCCTTCCATGTCCCTTGTATTGACAAGTGGCTCTCCTCCCACATCGAGTGCCCCCTTTGTCGTGCTCCGGTGACTGGAGTTTCGACTCAGGCACCGGAGACTTCAAGAGGGGGTTTCTCTGATCCTGTTCAAGCAGTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_171855.p1 GENE.R_Transcript_171855~~R_Transcript_171855.p1 ORF type:complete len:169 (+),score=36.08,zf-RING_2|PF13639.2|1.1e+04,zf-RING_2|PF13639.2|2.4e-14,zf-RING_11|PF17123.1|3.9e-09,zf-RING_11|PF17123.1|5.1e+03,zf-rbx1|PF12678.3|2.3e-07,zf-C3HC4|PF00097.21|2e-07,zf-C3HC4_2|PF13923.2|1.9e-06 R_Transcript_171855:313-819(+)
MGDSSSEALAPESLQQYQQQSQQFNLAMLYYGFFVIATAAIVLAIYHCLIIKWFAEASSTSRSSWDTPGRGGPTTARARKIVQLASSKYCKKTSQDGHEECVVCLSLFEEGEDIRELPACKHSFHVPCIDKWLSSHIECPLCRAPVTGVSTQAPETSRGGFSDPVQAV*

Click here to download the sequence:
Link to NCBI Protein BLAST