Transcript Information: R_Transcript_171869.p1


Annotated TAIR IDAT5G56880.1
Annotated Gene Nameunknown protein; Has 9 Blast hits to 9 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:23009140-23009619 | Reverse length=159
E-Value0.0001
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.71580239038113
Replicate 21.3379995363327
Replicate 30.89830343514323
Condition 2: 8 Hour
Replicate 11.4403449968968
Replicate 20.98650949299348
Replicate 31.2456987680658
Condition 3: 24 Hour
Replicate 12.1382271437568
Replicate 21.297368170034
Replicate 30.85834136027048


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_171869.p1 GENE.R_Transcript_171869~~R_Transcript_171869.p1 ORF type:5prime_partial len:204 (+),score=45.88 R_Transcript_171869:2-613(+)
AACCACCAAAAAATGGAACAACACCAGCAACAACAACACTCTGAAAACCAAAAACAAAAGCAAAAACAAAAACAAAAACAAAAACGTCCACTCCTCAACAACCTCACACCCCCTTCTAAGAAACCCAAACCCCATTTACCTCAAAGCGACGACGTTTTCTCAACAGACGATGATGAAACAGCTCAAGAAGTTATACTCTCGAACCTTCTTCTCGAAGAAGAAGGGAAAGGGGACCCACCAATGTGGACCCCACCACCCTACAGAGTGAGGTTCGTACCCTTTCCGTACTTGCTACCTCCACTGGACCAGTACTCCCCTTCTTCTTCTTACATTACCATCAATGGGAACGAAGAGTCCTGTGGGTCCTCCTTTTCTGACGTGGACTCCACGTCATTCATGACCAGCGTGGATGTTGGTGGCGGCGCGTGGGGTGGTGATGTCAAGGTGGCGCGTGAGAATGGTGTTTGTGATTATGATTGGGATTGGGAGGAGGTTTTGCTGGCTACTGCTGGGTTTTTGGGTGATGAGGTGATTGATGATGCTTCTAAGGGCGTGTTTGGTTGTGGTGGAAAATATGGAACTGGAGGGAAATTAGAGGAGCAAGAAAAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_171869.p1 GENE.R_Transcript_171869~~R_Transcript_171869.p1 ORF type:5prime_partial len:204 (+),score=45.88 R_Transcript_171869:2-613(+)
NHQKMEQHQQQQHSENQKQKQKQKQKQKRPLLNNLTPPSKKPKPHLPQSDDVFSTDDDETAQEVILSNLLLEEEGKGDPPMWTPPPYRVRFVPFPYLLPPLDQYSPSSSYITINGNEESCGSSFSDVDSTSFMTSVDVGGGAWGGDVKVARENGVCDYDWDWEEVLLATAGFLGDEVIDDASKGVFGCGGKYGTGGKLEEQEK*

Click here to download the sequence:
Link to NCBI Protein BLAST