Transcript Information: R_Transcript_171870.p1


Annotated TAIR IDAT5G56880.1
Annotated Gene Nameunknown protein; Has 9 Blast hits to 9 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:23009140-23009619 | Reverse length=159
E-Value1.3E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.16444108968215
Replicate 20
Replicate 30.30955050805611
Condition 2: 8 Hour
Replicate 10.11029668895156
Replicate 21.0072469297831
Replicate 30.40882005901773
Condition 3: 24 Hour
Replicate 10
Replicate 20.39739205208247
Replicate 30.98593264355393


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_171870.p1 GENE.R_Transcript_171870~~R_Transcript_171870.p1 ORF type:complete len:222 (+),score=48.75 R_Transcript_171870:85-666(+)
ATGGAACAACACCAGCACCACCACCACCAACACTCCGAAAACCAAAAACAAAAACGTCCACTCCTCAACAAAATCACACCCCCTTCTAAGAAACCGAAACCCCATTCCCCTCAAAACGACGACGTATTCTCAACAGACGATGATGAAACAGCTCAAGAAGTTATACTCTCGAACCTTCTTCTCGAAGAAGAAGGGAAAGGGGACCCACCAATGTGGACCCCACCACCCTACAGAGTGAGGTTCGTACCCTTTCCGTACTTGCTACCTCCACTGGACCAGTACTCCCCTTCTTCTTCTTACATTACCATCAATGGGAACGAAGAGTCCTGTGGGTCCTCCTTTTCTGACGTGGACTCCACGTCATTCATGGCCAGCGTGGATGTTGGTGGTGGCGCGTGGGGTGGTAATGTCAAGGTGGCGCGTGAGAGTGGTGTTTGTGATTGGGATTGGGATTGGGAGGAGGTTTTGCTGGCTACTGCTGGGTTTTTGGGTGATGAGGTGATTGATGATGCTTCTAAGGGCGTGTTTGGTTGTGGTGGAAAATATGGAACTGGAGGGAAATTAGAGGAGCAAGAAAAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_171870.p1 GENE.R_Transcript_171870~~R_Transcript_171870.p1 ORF type:complete len:222 (+),score=48.75 R_Transcript_171870:85-666(+)
MEQHQHHHHQHSENQKQKRPLLNKITPPSKKPKPHSPQNDDVFSTDDDETAQEVILSNLLLEEEGKGDPPMWTPPPYRVRFVPFPYLLPPLDQYSPSSSYITINGNEESCGSSFSDVDSTSFMASVDVGGGAWGGNVKVARESGVCDWDWDWEEVLLATAGFLGDEVIDDASKGVFGCGGKYGTGGKLEEQEK*

Click here to download the sequence:
Link to NCBI Protein BLAST