Transcript Information: R_Transcript_171900.p1


Annotated TAIR IDAT2G45190.1
Annotated Gene NamePlant-specific transcription factor YABBY family protein
Annotated Gene Symbol(s)AFO, FIL, YAB1
Annotation TypeOrtholog
Chromosome Positionchr2:18628450-18630552 | Reverse length=229
E-Value1.4E-67
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.70122666110671
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.33501588806476


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_171900.p1 GENE.R_Transcript_171900~~R_Transcript_171900.p1 ORF type:complete len:196 (+),score=36.72,YABBY|PF04690.9|0.0016,YABBY|PF04690.9|8.5e-39 R_Transcript_171900:44-589(+)
ATGTCATCGTCGTGGTCATCAAGTGGAGGAACAGCAACAGCTGCTGGGTTTGAGACTCCGGACCACCTCTCCCCTTGCGAGCAGCTCTGTTACGTCGGTTGCAACTTTTGTGACATTGTCCTTGTTGAGGAGATTCGGAACTCGGCGCCAAATTTGCTGATCAACAATCATCAGCCAATGTTGAATGAACCCATGATGCCAATGCGAGTTGATCATCATCAACATCATGAGATCCCTAAACCTCCACCCGTCAATCGACCTCCAGAGAAGAGACAGAGAGTCCCATCCGCCTACAACCGATTCATCAAGGACGAGATCCAACGCATCAAAGCTGGAAATCCTGACATTAGCCACAGGGAGGCCTTCAGTGCTGCGGCCAAGAATTGGGCCCACTTCCCACACATCCACTTCGGACTTATGCCTGACCATCAGCCCGTGAAGAAGGCTAACATGCGCCAACAACAGGAAGGAGAGCATGATATGGTGATGAAAGAAGGGTTTCTAGCACCTCCAACCAATGTCAATGTGGGGGTGGGCCCCTACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_171900.p1 GENE.R_Transcript_171900~~R_Transcript_171900.p1 ORF type:complete len:196 (+),score=36.72,YABBY|PF04690.9|0.0016,YABBY|PF04690.9|8.5e-39 R_Transcript_171900:44-589(+)
MSSSWSSSGGTATAAGFETPDHLSPCEQLCYVGCNFCDIVLVEEIRNSAPNLLINNHQPMLNEPMMPMRVDHHQHHEIPKPPPVNRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQPVKKANMRQQQEGEHDMVMKEGFLAPPTNVNVGVGPY*

Click here to download the sequence:
Link to NCBI Protein BLAST