Transcript Information: R_Transcript_171946.p1


Annotated TAIR IDAT5G53000.1
Annotated Gene Name2A phosphatase associated protein of 46 kD
Annotated Gene Symbol(s)TAP46
Annotation TypeOrtholog
Chromosome Positionchr5:21485654-21487869 | Reverse length=405
E-Value9.9E-69
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.252654183167
Replicate 21.3379995363327
Replicate 31.3474551527148
Condition 2: 8 Hour
Replicate 11.5603737466382
Replicate 20.87689732710532
Replicate 30.88978483433269
Condition 3: 24 Hour
Replicate 11.3504592486885
Replicate 21.513596198373
Replicate 31.3948047104395


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_171946.p1 GENE.R_Transcript_171946~~R_Transcript_171946.p1 ORF type:5prime_partial len:204 (+),score=36.02,TAP42|PF04177.8|5.2e-41 R_Transcript_171946:1-612(+)
TCTCTCTCTACCTCTCGAAAGCTCTTTCGAATTCTCAAGTATTTTCTTCATCAAAATCTCAATTCATCTCTCTCTCTCTCTCACAACTGGAACTTAATCTGTACAACTACTAGAAGAAGATGGATGGGAGAATCGAAAATGACAGAAATGACCTTACCGTCGTTATTCGAACAAGCTCGCAAGATTCATCAATTGGCCTCTGATTCCTCTCTTGATCAGGAAAGTGTAAAGAAGGGGATTAAAGTTCTGGAACATTGTGAGGAGATGATAAACAAGCTGGGCTTGTTTTCTACTAACGAAACTAAAGATGACATCTCCACTGCCAATCTCAAATATATCCTGGTGCCATACTATTTAGGTGAGTTGATAGAAAAAGTTTCGCAAGAGGATAGGTTGCAAATTCTTAATGCATCACAAGTAAAATTGAAGGAGTTTGTTTCATTTTGTGAAACCATGGAACTCATTCCTAAAGAAGAGCTGGCATTGTCCCATGAAGATGGTTCTAGTGATTTTGCTGATCAAAGGGCTAGAAATATTGCTCGGTTTAAACGTCAAAGAGCCGCTGAGTCAAAGCTGTTGGAAATGAAAGAGCGTAGAGAGCGACATGGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_171946.p1 GENE.R_Transcript_171946~~R_Transcript_171946.p1 ORF type:5prime_partial len:204 (+),score=36.02,TAP42|PF04177.8|5.2e-41 R_Transcript_171946:1-612(+)
SLSTSRKLFRILKYFLHQNLNSSLSLSHNWNLICTTTRRRWMGESKMTEMTLPSLFEQARKIHQLASDSSLDQESVKKGIKVLEHCEEMINKLGLFSTNETKDDISTANLKYILVPYYLGELIEKVSQEDRLQILNASQVKLKEFVSFCETMELIPKEELALSHEDGSSDFADQRARNIARFKRQRAAESKLLEMKERRERHG*

Click here to download the sequence:
Link to NCBI Protein BLAST