Transcript Information: R_Transcript_17198.p1


Annotated TAIR IDAT3G55580.1
Annotated Gene NameRegulator of chromosome condensation (RCC1) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:20612766-20615730 | Forward length=488
E-Value8.2E-150
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.889629922014
Replicate 24.7429659342602
Replicate 39.2762821670369
Condition 2: 8 Hour
Replicate 12.3608960692936
Replicate 22.0328074401078
Replicate 31.6501464200352
Condition 3: 24 Hour
Replicate 116.064140594592
Replicate 28.2023690088924
Replicate 315.858033974253


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_17198.p1 GENE.R_Transcript_17198~~R_Transcript_17198.p1 ORF type:complete len:363 (+),score=74.66,RCC1_2|PF13540.2|2.4e+03,RCC1_2|PF13540.2|0.011,RCC1_2|PF13540.2|0.00025,RCC1_2|PF13540.2|9.3e-06,RCC1_2|PF13540.2|7e-06,RCC1|PF00415.14|1e+04,RCC1|PF00415.14|3.7e+03,RCC1|PF00415.14|1.3,RCC1|PF00415.14|14,RCC1|PF00415.14|0.0091,RCC1|PF00415.14|6.5e-07,RCC1|PF00415.14|1.6e+02 R_Transcript_17198:245-1333(+)
ATGAATGGGGAGGAGAGAGAAGTGAAAATGGAGGAAAAGGGAGAAAAGTTGGTTTATATGTGGGGATACTTGCCTGGAGCTTTGCCTCAAAGAACGCCTTTACAATCGCCGTTACTTGTCAAGCTTCCTCCGTCTATTGGCTCTTGGAAAGACGTTTGTGGTGGGGGTTGTGGCTTCGCTATGGCCCTCTCTGATACTGGAAAGCTAATCACATGGGGTTCAACTGATGATTTAGGGCAGAGCTATGTGACTTCTGGCAAACATGGGGAAACACCAGAGCCTTTTCCTCTTCCTACAGAAACTTCCATTGTAAGAGCAGCTGCTGGGTGGGCCCATTGTGTCTCAGTTACAGATAGAGGAGAAGTTTACACATGGGGTTGGAAGGAGTGTGTTCCATCGGGGAAGGTTTTTGGAGACTCCCCAACTGGGGGAAGCATGGAGAAGGATATGCTTGACAGACAGAGTCCATCCACAGAGCAAGTGAGCCCTCGCTCCCAAGGGTCCAAAAATGCTAGTGGGTCAGGAACTGCTGTAGAAGAAACTGCAAAACGGAGAAGGGTATCATCAGCCAAACAAACTGCAGATGCTTCCACAACCAGTGAGGAAACTCTTTCTGCATTGCCCTGTCTAGTGACGCTTAGCCCAGGAGTAAGGATATCAACTGTAGCAGCCGGGGGACGGCATTCTTTAGCATTGTCAGATGTAGGACAAGTGTGGGGTTGGGGCTATGGAGGTGAAGGGCAGTTGGGTCTGGGCTCAAGAATACGCATGGTGTCTTCTCCACATCCAGTACCATGTATCGAGTCATCCTATAGGAAAGATAGGCTTTCGGGATTTCCTCAAGGAAGCTTAAGTGCAGATGGCCATGGATATAGGATTCCCGGGACTTACATCAAGGGTATTGCCTGTGGAGGGAGGCACAGTGCTGTAATCACAGATGCTGGAGCAATACTTGCTTTTGGTTGGGGCCTCTATGGACAGGTATGGGATTTACCCCTCCCCCCCCTTTTTCGTCCATGTTTGCTTCTTGGAATTATTTGTGGCAGATGTTGCACGGTTCCTGCTTCTTGGCTATATTTCACGATATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_17198.p1 GENE.R_Transcript_17198~~R_Transcript_17198.p1 ORF type:complete len:363 (+),score=74.66,RCC1_2|PF13540.2|2.4e+03,RCC1_2|PF13540.2|0.011,RCC1_2|PF13540.2|0.00025,RCC1_2|PF13540.2|9.3e-06,RCC1_2|PF13540.2|7e-06,RCC1|PF00415.14|1e+04,RCC1|PF00415.14|3.7e+03,RCC1|PF00415.14|1.3,RCC1|PF00415.14|14,RCC1|PF00415.14|0.0091,RCC1|PF00415.14|6.5e-07,RCC1|PF00415.14|1.6e+02 R_Transcript_17198:245-1333(+)
MNGEEREVKMEEKGEKLVYMWGYLPGALPQRTPLQSPLLVKLPPSIGSWKDVCGGGCGFAMALSDTGKLITWGSTDDLGQSYVTSGKHGETPEPFPLPTETSIVRAAAGWAHCVSVTDRGEVYTWGWKECVPSGKVFGDSPTGGSMEKDMLDRQSPSTEQVSPRSQGSKNASGSGTAVEETAKRRRVSSAKQTADASTTSEETLSALPCLVTLSPGVRISTVAAGGRHSLALSDVGQVWGWGYGGEGQLGLGSRIRMVSSPHPVPCIESSYRKDRLSGFPQGSLSADGHGYRIPGTYIKGIACGGRHSAVITDAGAILAFGWGLYGQVWDLPLPPLFRPCLLLGIICGRCCTVPASWLYFTI*

Click here to download the sequence:
Link to NCBI Protein BLAST