Transcript Information: R_Transcript_17201.p2


Annotated TAIR IDAT3G55580.1
Annotated Gene NameRegulator of chromosome condensation (RCC1) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:20612766-20615730 | Forward length=488
E-Value6.5E-89
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 182.489342776133
Replicate 266.084509643605
Replicate 367.398670234833
Condition 2: 8 Hour
Replicate 112.399893146361
Replicate 212.470491796046
Replicate 311.984717268589
Condition 3: 24 Hour
Replicate 1109.78541148633
Replicate 271.820971259059
Replicate 384.885008561365


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_17201.p2 GENE.R_Transcript_17201~~R_Transcript_17201.p2 ORF type:complete len:156 (+),score=34.40,RCC1|PF00415.14|2e-06,RCC1|PF00415.14|4.3e-12,RCC1|PF00415.14|2.6e-13,RCC1_2|PF13540.2|8.2e-07,RCC1_2|PF13540.2|6.1e-11,RCC1_2|PF13540.2|2.3 R_Transcript_17201:3278-3745(+)
ATGCATGTTGACTGTGATTTCTTGCAGTGTGGGCAAGGGAGCACGGATGATGTATTAAGCCCTACTTGCGTATCGGCCTTGCTTGGTGTTAGAATTGAGGCTGTTGCGGCAGGACTGTGGCATACTGTCTGCATTTCTGCTGATGGTGGTGTATACGCATTTGGAGGGAATCAGTTTGGCCAGCTGGGAACCGGTTCTGATCAAGCTCAGACTCTTCCCAGGCTATTGGATGCTCCAAGCATAGAGAATATCAATGCAAAGATAGTGTCTTGTGGTGCTCGTCATAGTGCTATTGTCACAGAGGATGGAGAAATATTCTGCTGGGGATGGAACAAGTATGGACAGCTTGGTTTGGGTGATGTGATTGATCGTAATATTCCTTCTCAAGTGAAGATTGACGGTTGTGTGGCACGAAACATTGCCTGTGGCTGGTGGCATACACTACTCCTAGCCGAGTCTCCTACTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_17201.p2 GENE.R_Transcript_17201~~R_Transcript_17201.p2 ORF type:complete len:156 (+),score=34.40,RCC1|PF00415.14|2e-06,RCC1|PF00415.14|4.3e-12,RCC1|PF00415.14|2.6e-13,RCC1_2|PF13540.2|8.2e-07,RCC1_2|PF13540.2|6.1e-11,RCC1_2|PF13540.2|2.3 R_Transcript_17201:3278-3745(+)
MHVDCDFLQCGQGSTDDVLSPTCVSALLGVRIEAVAAGLWHTVCISADGGVYAFGGNQFGQLGTGSDQAQTLPRLLDAPSIENINAKIVSCGARHSAIVTEDGEIFCWGWNKYGQLGLGDVIDRNIPSQVKIDGCVARNIACGWWHTLLLAESPT*

Click here to download the sequence:
Link to NCBI Protein BLAST