Transcript Information: R_Transcript_17204.p1


Annotated TAIR IDAT3G55580.1
Annotated Gene NameRegulator of chromosome condensation (RCC1) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:20612766-20615730 | Forward length=488
E-Value1.9E-244
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 119.100144796499
Replicate 213.023021777197
Replicate 318.170745434923
Condition 2: 8 Hour
Replicate 12.2729494887738
Replicate 23.1135405095322
Replicate 35.3229406671599
Condition 3: 24 Hour
Replicate 125.37951685088
Replicate 219.356514131815
Replicate 320.410053737571


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_17204.p1 GENE.R_Transcript_17204~~R_Transcript_17204.p1 ORF type:complete len:474 (+),score=107.41,RCC1|PF00415.14|1.4e+04,RCC1|PF00415.14|5.5e+03,RCC1|PF00415.14|1.9,RCC1|PF00415.14|19,RCC1|PF00415.14|0.013,RCC1|PF00415.14|7.5e-07,RCC1|PF00415.14|8.9e-11,RCC1|PF00415.14|2e-11,RCC1|PF00415.14|1.6e-12,RCC1_2|PF13540.2|3.8e+03,RCC1_2|PF13540.2|0.015,RCC1_2|PF13540.2|0.00035,RCC1_2|PF13540.2|1.3e-05,RCC1_2|PF13540.2|1.6e-05,RCC1_2|PF13540.2|3.9e-06,RCC1_2|PF13540.2|1.1e-09,RCC1_2|PF13540.2|9 R_Transcript_17204:245-1666(+)
ATGAATGGGGAGGAGAGAGAAGTGAAAATGGAGGAAAAGGGAGAAAAGTTGGTTTATATGTGGGGATACTTGCCTGGAGCTTTGCCTCAAAGAACGCCTTTACAATCGCCGTTACTTGTCAAGCTTCCTCCGTCTATTGGCTCTTGGAAAGACGTTTGTGGTGGGGGTTGTGGCTTCGCTATGGCCCTCTCTGATACTGGAAAGCTAATCACATGGGGTTCAACTGATGATTTAGGGCAGAGCTATGTGACTTCTGGCAAACATGGGGAAACACCAGAGCCTTTTCCTCTTCCTACAGAAACTTCCATTGTAAGAGCAGCTGCTGGGTGGGCCCATTGTGTCTCAGTTACAGATAGAGGAGAAGTTTACACATGGGGTTGGAAGGAGTGTGTTCCATCGGGGAAGGTTTTTGGAGACTCCCCAACTGGGGGAAGCATGGAGAAGGATATGCTTGACAGACAGAGTCCATCCACAGAGCAAGTGAGCCCTCGCTCCCAAGGGTCCAAAAATGCTAGTGGGTCAGGAACTGCTGTAGAAGAAACTGCAAAACGGAGAAGGGTATCATCAGCCAAACAAACTGCAGATGCTTCCACAACCAGTGAGGAAACTCTTTCTGCATTGCCCTGTCTAGTGACGCTTAGCCCAGGAGTAAGGATATCAACTGTAGCAGCCGGGGGACGGCATTCTTTAGCATTGTCAGATGTAGGACAAGTGTGGGGTTGGGGCTATGGAGGTGAAGGGCAGTTGGGTCTGGGCTCAAGAATACGCATGGTGTCTTCTCCACATCCAGTACCATGTATCGAGTCATCCTATAGGAAAGATAGGCTTTCGGGATTTCCTCAAGGAAGCTTAAGTGCAGATGGCCATGGATATAGGATTCCCGGGACTTACATCAAGGGTATTGCCTGTGGAGGGAGGCACAGTGCTGTAATCACAGATGCTGGAGCAATACTTGCTTTTGGTTGGGGCCTCTATGGACAGTGTGGGCAAGGGAGCACGGATGATGTATTAAGCCCTACTTGCGTATCGGCCTTGCTTGGTGTTAGAATTGAGGCTGTTGCGGCAGGACTGTGGCATACTGTCTGCATTTCTGCTGATGGTGGTGTATACGCATTTGGAGGGAATCAGTTTGGCCAGCTGGGAACCGGTTCTGATCAAGCTCAGACTCTTCCCAGGCTATTGGATGCTCCAAGCATAGAGAATATCAATGCAAAGATAGTGTCTTGTGGTGCTCGTCATAGTGCTATGGTCACAGAGGATGGAGAAATCTTCTGCTGGGGTTGGAACAAGTATGGACAGCTTGGTTTGGGTGATGTGATTGATCGTAATATTCCTTCTCAAGTGAAGATTGACGGTTGTGTGGCACGAAACATTGCCTGTGGCTGGTGGCATACACTACTCCTAGCCGAGTCTCCTACTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_17204.p1 GENE.R_Transcript_17204~~R_Transcript_17204.p1 ORF type:complete len:474 (+),score=107.41,RCC1|PF00415.14|1.4e+04,RCC1|PF00415.14|5.5e+03,RCC1|PF00415.14|1.9,RCC1|PF00415.14|19,RCC1|PF00415.14|0.013,RCC1|PF00415.14|7.5e-07,RCC1|PF00415.14|8.9e-11,RCC1|PF00415.14|2e-11,RCC1|PF00415.14|1.6e-12,RCC1_2|PF13540.2|3.8e+03,RCC1_2|PF13540.2|0.015,RCC1_2|PF13540.2|0.00035,RCC1_2|PF13540.2|1.3e-05,RCC1_2|PF13540.2|1.6e-05,RCC1_2|PF13540.2|3.9e-06,RCC1_2|PF13540.2|1.1e-09,RCC1_2|PF13540.2|9 R_Transcript_17204:245-1666(+)
MNGEEREVKMEEKGEKLVYMWGYLPGALPQRTPLQSPLLVKLPPSIGSWKDVCGGGCGFAMALSDTGKLITWGSTDDLGQSYVTSGKHGETPEPFPLPTETSIVRAAAGWAHCVSVTDRGEVYTWGWKECVPSGKVFGDSPTGGSMEKDMLDRQSPSTEQVSPRSQGSKNASGSGTAVEETAKRRRVSSAKQTADASTTSEETLSALPCLVTLSPGVRISTVAAGGRHSLALSDVGQVWGWGYGGEGQLGLGSRIRMVSSPHPVPCIESSYRKDRLSGFPQGSLSADGHGYRIPGTYIKGIACGGRHSAVITDAGAILAFGWGLYGQCGQGSTDDVLSPTCVSALLGVRIEAVAAGLWHTVCISADGGVYAFGGNQFGQLGTGSDQAQTLPRLLDAPSIENINAKIVSCGARHSAMVTEDGEIFCWGWNKYGQLGLGDVIDRNIPSQVKIDGCVARNIACGWWHTLLLAESPT*

Click here to download the sequence:
Link to NCBI Protein BLAST