Transcript Information: R_Transcript_172078.p1


Annotated TAIR ID
Annotated Gene Name
Annotated Gene Symbol(s)
Annotation Type
Chromosome Position
E-Value
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.095766505536
Replicate 21.1099365858836
Replicate 32.8759560418077
Condition 2: 8 Hour
Replicate 11.5101414504909
Replicate 22.2163869666373
Replicate 33.0785771316515
Condition 3: 24 Hour
Replicate 13.7420214424011
Replicate 22.5747328660806
Replicate 34.2425506882092


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_172078.p1 GENE.R_Transcript_172078~~R_Transcript_172078.p1 ORF type:complete len:454 (+),score=112.93,Met_gamma_lyase|PF06838.7|7.6e-164 R_Transcript_172078:1622-2983(+)
ATGATGTTGGTCTTATACAATTCTCCATTGGCTTATTATTCCTTGAAAACTTTCAAACCCGTAAAAGCTGTAGCCTCAAAATCTCCACTGTCCTCTTCTCTCACTTTTTCTGTTCATCCTCGTAAACTTCCCAGTCCATTCGTGCCTGAGGTTGAGGAGGCAGTGGCTGCACTGCACTTAGAGTTCCAAGACGTTGATAAACTGGTGGCACACAATACTTCCCGTGTTCTGAAAGCTTACCAGAATGCTCGTGTTGGTTCTCATTTTTTTTCTGGATCCACTGGTTATGGGCATGATGAAGCTGGAGGACGTGAAGGACTTGACCAAGCATTTGCTGAAATTTTTGGTGCTGAGAGTGCTATCGTCCGTTCACAGTTTTTCTCAGGAACTCATGCTATCACTTGTGCCTTGTTTGCTATGTTGAGGCCTGGTGATGAGCTTCTGGCAGTTGCTGGTGCCCCTTATGACACTTTGGAGGAAGTCATTGGAAAGAGGGACTGTAATGGGCTTGGATCCCTGAAGGATTTTGGAGTGAAATATCGAGAACTTCCTCTTGCTGAGGATGGTGGACTTGACTGGGATGGTTTGGCAAGCGCTGTAAGTCCTCTTACAAGTTGTGCACTAATACAAAGATCATGTGGTTATTCATGGCGTTGCAGTCTGAGTGTCAATGAGATAGGGAGAGCTATAGAGATGATAAAGATACAGAATCCAGATTGTTTGGTTATGGTGGATAATTGCTACGGTGAATTTGTTGATACCATTGAACCTCCCATGGTGGGTGCTGATTTGATTGCAGGAAGTCTGATAAAGAACCCTGGAGGGACTATAGCACCATGTGGTGGATATGTTGCTGGGAGGGAAAAATGGGTTAAGGCAGCAGCAGCTCGTTTATCTGCCCCAGGACTTGGGATTGATTGTGGCTCAACTCCTGGTGATGTAATGCGGGCATTTTTTCAGGGATTATTCCTTTCACCTCAGATGGTTGGGGAAGCCATAAAGGGTTCCCTGTTAATTGCTGAAGTTATGGCGTCCAAAGGGTTCAAGGTTCAGCCACGTCCTCGAGTTCCAAGAAATGATACAGTACAGGCTGTACAGCTTGAAAATTGTGAACGTCTTCTTGCATTCTGTGAGGCTGTGCAGAGAAGTTCTCCTGTGAGTGCTTTTACTAAACCAGTGGCTGGAGCAACTGCTGGATATGCGTCAGAGGTGATCTTTGCTGATGGAACATTCATTGATGGGAGTACCAGTGAGCTGTCATGTGATGGACCACTGAGGGAGCCGTTTGCCGTATTCTGTCAGGGTGGTACACACTGGACTCAATGGGGATTGATTCTAGGAGAGGTTCTGAAGTCCATTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_172078.p1 GENE.R_Transcript_172078~~R_Transcript_172078.p1 ORF type:complete len:454 (+),score=112.93,Met_gamma_lyase|PF06838.7|7.6e-164 R_Transcript_172078:1622-2983(+)
MMLVLYNSPLAYYSLKTFKPVKAVASKSPLSSSLTFSVHPRKLPSPFVPEVEEAVAALHLEFQDVDKLVAHNTSRVLKAYQNARVGSHFFSGSTGYGHDEAGGREGLDQAFAEIFGAESAIVRSQFFSGTHAITCALFAMLRPGDELLAVAGAPYDTLEEVIGKRDCNGLGSLKDFGVKYRELPLAEDGGLDWDGLASAVSPLTSCALIQRSCGYSWRCSLSVNEIGRAIEMIKIQNPDCLVMVDNCYGEFVDTIEPPMVGADLIAGSLIKNPGGTIAPCGGYVAGREKWVKAAAARLSAPGLGIDCGSTPGDVMRAFFQGLFLSPQMVGEAIKGSLLIAEVMASKGFKVQPRPRVPRNDTVQAVQLENCERLLAFCEAVQRSSPVSAFTKPVAGATAGYASEVIFADGTFIDGSTSELSCDGPLREPFAVFCQGGTHWTQWGLILGEVLKSI*

Click here to download the sequence:
Link to NCBI Protein BLAST