Transcript Information: R_Transcript_172117.p1


Annotated TAIR IDAT3G13020.1
Annotated Gene NamehAT transposon superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:4166995-4168917 | Reverse length=605
E-Value1.2E-125
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3614086899928
Replicate 20.95701369300806
Replicate 31.07573077109
Condition 2: 8 Hour
Replicate 10.67640510903992
Replicate 21.2045226406164
Replicate 31.8302038332711
Condition 3: 24 Hour
Replicate 11.5537742460739
Replicate 20.73111355438378
Replicate 32.3580676320138


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_172117.p1 GENE.R_Transcript_172117~~R_Transcript_172117.p1 ORF type:complete len:724 (+),score=138.91,DUF659|PF04937.11|5.4e-48,Dimer_Tnp_hAT|PF05699.10|1.9e-05 R_Transcript_172117:308-2479(+)
ATGGCTCCAATTAATCCTTCTACTGATCCTTCTAAAGAAGCTTATAATCATGGAATGGCTCTTGATCCTGAGAACAAGAGAATTCAGTGTTGCTACTGTGGTAAAGTGGTTCCGGGGTTTAACCGCCTTCAGCATCACTTGGGAGGGATTCGAGGGAACATAGTAGTGTGTCCAGATGTTCCCGAGGATGTGAAGAATTTCTTCAACGAAAGCCTGTGTTCGTTGAAATTAGGTCGCTTAGTGAAGGAAGTTGGAGATTTGAACCACCCCGGCCCTCCTTTGAAGAGGACTAGCAATTCTAATTCGAAAGCAAATGGGATGAAAAAGGAAAAGGTGACAGGTACTCAGAAAAGTCCAGTTAAGGTTCAGAAACCCAGGCTCGAAAACTCAATAGGTAGATGTAGCTTGAGTTCTTATTGCAATGCGAGGTCTGCTTCTCAGAATACTTGCCCTGGAAAAGAAGGGCAAGATTCTGCTTTTGTTATGACCAAAAGATGTATTGGCAGGTTTTTCTTTGAGAATGGCATTGACTTTGATGCTGTTACATCTCCTAGCTTTAGGAGCATGATGGAGATTTCTCTGAAAAGTAGCGAGACAATGTGTAGTAGCCCTAGTACAGCAGAGCTTAAGGGATGGATCCTTGATGATGAGTTACATGATATAAAAAACTATGTAAAGGAGATACAACTTTCTTGGCCTCGCACTGGATGTAGCATTCTGCTCGATGGGTGGACCGATCACTCTAGTAGGAACCTGATTAATGTTATAGTCGACTGTCCTGAGGGGCCTGTATACCTTAGGTCAGCAGATGTTTCCCCGTCAACAAAGGGTGAGAATGCATTCCAACTGTTGCTTGAAGCTGTTTTAGAGGAAGTGGGTATTCAGAATGTTGTTCAGATTATTTCTCACACCTCGTCAGACAGCATGGAGGCTGTTAGTAAGCAGCTCATTGAGAAGTATAGATCGCTTTTCTGGACCGTTAGTGCAGCCCATTGCATATCACTGATTTTAGATAAGATTGCAGTGACTGGTTCAGTTAAGCTAACATTGGAAAAGGCAAAGGCTATTACAAAGTTCATTTATAGCCGTCCTGCTGTATTGAATCTGCTGAGGAGGCACATTAGCAGCCATGATCTTATTAGTCCCTCAAAAATCAAGGCTGCTGCATCTTTCCTGACTTTAGAGAATTTTGTGGGGGAAAAGAGTAACTTGGAGCTCATGTTTACTTCCTCAGAGTGGTTGAACTCTTCTTGGGCATCTAGTGTTGAAGGTGAAAAAGTTGCTAATCTGATCGGTGATAGCTCCTTTTGGGATGGGGTGATCATTGCTGTGAAAGCATCTATTCCATTAGTAAGAGCAATATCCTTGATTAATGAGGATGGTGAACCAAATACAGGATTCATATATGAAACTATGGATCAAGTTAAGGAAACCATCAGCGAGGAATTTCAAGGAAAGAAATCACATTATACACATTTTTGGAACATCATTGATGAGATTTGGAACACAGTTCTTCATAGTCCTCTACATGCTGCTGGTTACTTCCTTAATCCAAGACTTCATTATACTGAAGACTTTTTTTCTGATACTGAAGTTGCCGGTGGCTTGCTGATCGCCATTGTTCGGATGGTTGAGGATCAGCGCGCCCAGGATTTGGTCACTCAGCAGCTTGATGTTTATGGAAATTGTAAAGGTGATTTCAAAATAGGGACTCAAAATGACCACCAAGATACCTTATCTCCAGCTACATGGTGGTCCCGTTTTGGAGGTCACTGCCCTGAACTGCAAAAGATAGCCGTGAGAATCCTTAGCCAGACCTGTAAAGGAGCTGAATCTTACGGGCTTAGAAGGGATTTAGCTGAGAAACTTCTACTAAATGGTAGGAATTTCGCAGAACAGCAGCAACTACATGACCTCACATATGTTCACTACAATCTGAAATTGAAGCAATTCAAGATGGGGGTGAAATTCGAGATTAAAAGCAACGAAATTGACCTTATGAGTGACTGGACTGTGGATGAACTACATCAGCCTGAGATGGGTGGGTCAGAAAGTGGGGACCACACACGGGCGAATACTAATTGTGCCGTCACAAACTTTAACAGAAGCACAGTTCAGGAACAAAAGCCTTCTGATGTTCAGCCAAAGATGGAGGCCAAATCTGAAAGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_172117.p1 GENE.R_Transcript_172117~~R_Transcript_172117.p1 ORF type:complete len:724 (+),score=138.91,DUF659|PF04937.11|5.4e-48,Dimer_Tnp_hAT|PF05699.10|1.9e-05 R_Transcript_172117:308-2479(+)
MAPINPSTDPSKEAYNHGMALDPENKRIQCCYCGKVVPGFNRLQHHLGGIRGNIVVCPDVPEDVKNFFNESLCSLKLGRLVKEVGDLNHPGPPLKRTSNSNSKANGMKKEKVTGTQKSPVKVQKPRLENSIGRCSLSSYCNARSASQNTCPGKEGQDSAFVMTKRCIGRFFFENGIDFDAVTSPSFRSMMEISLKSSETMCSSPSTAELKGWILDDELHDIKNYVKEIQLSWPRTGCSILLDGWTDHSSRNLINVIVDCPEGPVYLRSADVSPSTKGENAFQLLLEAVLEEVGIQNVVQIISHTSSDSMEAVSKQLIEKYRSLFWTVSAAHCISLILDKIAVTGSVKLTLEKAKAITKFIYSRPAVLNLLRRHISSHDLISPSKIKAAASFLTLENFVGEKSNLELMFTSSEWLNSSWASSVEGEKVANLIGDSSFWDGVIIAVKASIPLVRAISLINEDGEPNTGFIYETMDQVKETISEEFQGKKSHYTHFWNIIDEIWNTVLHSPLHAAGYFLNPRLHYTEDFFSDTEVAGGLLIAIVRMVEDQRAQDLVTQQLDVYGNCKGDFKIGTQNDHQDTLSPATWWSRFGGHCPELQKIAVRILSQTCKGAESYGLRRDLAEKLLLNGRNFAEQQQLHDLTYVHYNLKLKQFKMGVKFEIKSNEIDLMSDWTVDELHQPEMGGSESGDHTRANTNCAVTNFNRSTVQEQKPSDVQPKMEAKSER*

Click here to download the sequence:
Link to NCBI Protein BLAST