Transcript Information: R_Transcript_172150.p1


Annotated TAIR IDAT4G33030.1
Annotated Gene Namesulfoquinovosyldiacylglycerol 1
Annotated Gene Symbol(s)SQD1
Annotation TypeOrtholog
Chromosome Positionchr4:15936051-15937566 | Forward length=477
E-Value1.9E-280
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.5348971316071
Replicate 24.173177722494
Replicate 34.6951698178449
Condition 2: 8 Hour
Replicate 15.12023262872
Replicate 25.0925403779098
Replicate 36.1632797965703
Condition 3: 24 Hour
Replicate 16.1791199577672
Replicate 24.4293170028696
Replicate 36.5255268631744


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_172150.p1 GENE.R_Transcript_172150~~R_Transcript_172150.p1 ORF type:complete len:483 (+),score=82.20,Epimerase|PF01370.17|3e-23,GDP_Man_Dehyd|PF16363.1|4.9e-22 R_Transcript_172150:234-1682(+)
ATGGCTCATCTGCTTTCGGCTTCTTGTTCTGTGAAACTATCCCCGAGTGAGAAGACTTTCTCTAAACATTGTAATTTGGGTTTGACCAAGTATCCATCATCATTTACCCTGAAAACTTCAAAATCGTCGTTTAAAAGGCTCGTCCACCAAGGAAACAACCCCCGAAGATTACATGTTGTTCGTGCGACCACTGTTCCTCTAAATCAGGAAGCTAAAGCTCAACCTGGGTCTAGTTCCCATGAAAAGAGTGAAAGCGCATCAAATTGCAAGCGAGTTATGGTTATTGGTGGAGATGGTTATTGTGGTTGGGCAACAGCCCTTCATTTATCTAACAAAGGTTATGAAGTTGCCATTGTTGACAACCTTGTTCGTCGTCTTTTTGATCATCAGCTTGGTCTTGATTCCTTGACTCCTATTGCCTCCATTCACAACCGCATTCGTCGTTGGAAGTCATTAACTGGCAAAACAATTGATCTTTATGTTGGTGATATCTGTGACTTTGAATTCCTAGCGGAAACCTTCAAGTCATACGAACCTGATGCTGTTGTTCACTTTGGGGAGCAGCGTTCTGCCCCCTATTCTATGATTGACCGTTCAAGAGCTGTATACACTCAGCAGAACAATGTAATTGGGACACTCAATGTTCTTTTTGCTATAAAAGAGTTCAGGGAAGAATGTCATCTGGTAAAATTAGGCACAATGGGAGAATATGGAACTCCAAATATTGACATTGAAGAAGGTTATATAACTATCACTCATAATGGAAGAACTGATACTTTGCCTTACCCGAAGCAGGCTAGCTCTTTCTACCATTTGAGTAAGGTCCACGATTCACATAATATAGCCTTTACATGCAAGGCCTGGGGGATCAGAGCAACCGATTTGAATCAAGGTGTTGTATATGGGGTGAGGACAGACGAGACAGCACTGCATGAAGAGCTCTGTAACAGATTGGACTATGATGCTGTGTTTGGGACAGCATTAAATCGATTCTGTGTGCAAGCTGCTGTTGGGCATCCATTAACTGTCTATGGCAAGGGTGGCCAGACTAGGGGATATCTTGATATAAGAGATACTGTTCAGTGTGTCGAGTTGGCCATTGCAAACCCTGCACAACCTGGTGAATTTAGAGTCTTTAATCAATTCACAGAGCAGTTTTCTGTAAGAGATCTTGCTGCACTCGTAACTAAAGCGGGAGAAAAACTTGGATTGAATGTAGAAACCATATCTGTTCCTAACCCAAGAGTTGAGGCAGAGGAGCATTACTACAATGCCAAGCATACTAAGCTAATCGAGCTGGGACTCAAACCCCATCTTTTATCAGACTCACTCCTTGACTCTTTGCTGAACTTTGCAATTCAGTACAAAGACCGTGTTGACAAAAAACAGATTATGCCTGCTGTCTCTTGGAGAAAGATTGGAGTCAAGCCACAAACGGTTCAAGCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_172150.p1 GENE.R_Transcript_172150~~R_Transcript_172150.p1 ORF type:complete len:483 (+),score=82.20,Epimerase|PF01370.17|3e-23,GDP_Man_Dehyd|PF16363.1|4.9e-22 R_Transcript_172150:234-1682(+)
MAHLLSASCSVKLSPSEKTFSKHCNLGLTKYPSSFTLKTSKSSFKRLVHQGNNPRRLHVVRATTVPLNQEAKAQPGSSSHEKSESASNCKRVMVIGGDGYCGWATALHLSNKGYEVAIVDNLVRRLFDHQLGLDSLTPIASIHNRIRRWKSLTGKTIDLYVGDICDFEFLAETFKSYEPDAVVHFGEQRSAPYSMIDRSRAVYTQQNNVIGTLNVLFAIKEFREECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETALHEELCNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFTEQFSVRDLAALVTKAGEKLGLNVETISVPNPRVEAEEHYYNAKHTKLIELGLKPHLLSDSLLDSLLNFAIQYKDRVDKKQIMPAVSWRKIGVKPQTVQA*

Click here to download the sequence:
Link to NCBI Protein BLAST