Transcript Information: R_Transcript_172151.p1


Annotated TAIR IDAT4G33030.1
Annotated Gene Namesulfoquinovosyldiacylglycerol 1
Annotated Gene Symbol(s)SQD1
Annotation TypeOrtholog
Chromosome Positionchr4:15936051-15937566 | Forward length=477
E-Value1.6E-259
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.5403093832089
Replicate 23.85108022711
Replicate 34.4317055148335
Condition 2: 8 Hour
Replicate 18.1209401332572
Replicate 26.5172419436621
Replicate 35.427240361372
Condition 3: 24 Hour
Replicate 14.6723175513669
Replicate 24.9873701008843
Replicate 34.4545328634138


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_172151.p1 GENE.R_Transcript_172151~~R_Transcript_172151.p1 ORF type:5prime_partial len:398 (+),score=70.44,Epimerase|PF01370.17|1.7e-23,GDP_Man_Dehyd|PF16363.1|2.6e-22 R_Transcript_172151:3-1196(+)
AAGCGAGTTATGGTTATTGGTGGAGATGGTTATTGTGGTTGGGCAACAGCCCTTCATTTATCTAACAAAGGTTATGAAGTTGCCATTGTTGACAACCTTGTTCGTCGTCTTTTTGATCATCAGCTTGGTCTTGATTCCTTGACTCCTATTGCCTCCATTCACAACCGCATTCGTCGTTGGAAGTCATTAACTGGCAAAACAATTGATCTTTATGTTGGTGATATCTGTGACTTTGAATTCCTAGCGGAAACCTTCAAGTCATACGAACCTGATGCTGTTGTTCACTTTGGGGAGCAGCGTTCTGCCCCCTATTCTATGATTGACCGTTCAAGAGCTGTATACACTCAGCAGAACAATGTAATTGGGACACTCAATGTTCTTTTTGCTATAAAAGAGTTCAGGGAAGAATGTCATCTGGTAAAATTAGGCACAATGGGAGAATATGGAACTCCAAATATTGACATTGAAGAAGGTTATATAACTATCACTCATAATGGAAGAACTGATACTTTGCCTTACCCGAAGCAGGCTAGCTCTTTCTACCATTTGAGTAAGGTCCACGATTCACATAATATAGCCTTTACATGCAAGGCCTGGGGGATCAGAGCAACCGATTTGAATCAAGGTGTTGTATATGGGGTGAGGACAGACGAGACAGCACTGCATGAAGAGCTCTGTAACAGATTGGACTATGATGCTGTGTTTGGGACAGCATTAAATCGATTCTGTGTGCAAGCTGCTGTTGGGCATCCATTAACTGTCTATGGCAAGGGTGGCCAGACTAGGGGATATCTTGATATAAGAGATACTGTTCAGTGTGTCGAGTTGGCCATTGCAAACCCTGCACAACCTGGTGAATTTAGAGTCTTTAATCAATTCACAGAGCAGTTTTCTGTAAGAGATCTTGCTGCACTCGTAACTAAAGCGGGAGAAAAACTTGGATTGAATGTAGAAACCATATCTGTTCCTAACCCAAGAGTTGAGGCAGAGGAGCATTACTACAATGCCAAGCATACTAAGCTAATCGAGCTGGGACTCAAACCCCATCTTTTATCAGACTCACTCCTTGACTCTTTGCTGAACTTTGCAATTCAGTACAAAGACCGTGTTGACAAAAAAACAGATTATGCCTGCTGTCTCTTGGAGAAAGATTGGAGTCAAGCCACAAACGGTTCAAGCTTAAGAGTTCCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_172151.p1 GENE.R_Transcript_172151~~R_Transcript_172151.p1 ORF type:5prime_partial len:398 (+),score=70.44,Epimerase|PF01370.17|1.7e-23,GDP_Man_Dehyd|PF16363.1|2.6e-22 R_Transcript_172151:3-1196(+)
KRVMVIGGDGYCGWATALHLSNKGYEVAIVDNLVRRLFDHQLGLDSLTPIASIHNRIRRWKSLTGKTIDLYVGDICDFEFLAETFKSYEPDAVVHFGEQRSAPYSMIDRSRAVYTQQNNVIGTLNVLFAIKEFREECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETALHEELCNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFTEQFSVRDLAALVTKAGEKLGLNVETISVPNPRVEAEEHYYNAKHTKLIELGLKPHLLSDSLLDSLLNFAIQYKDRVDKKTDYACCLLEKDWSQATNGSSLRVP*

Click here to download the sequence:
Link to NCBI Protein BLAST