Transcript Information: R_Transcript_172241.p1


Annotated TAIR IDAT3G07040.1
Annotated Gene NameNB-ARC domain-containing disease resistance protein
Annotated Gene Symbol(s)RPM1, RPS3
Annotation TypeHomolog
Chromosome Positionchr3:2226244-2229024 | Reverse length=926
E-Value2E-96
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4118312340666
Replicate 20.90481294611671
Replicate 31.1390090517424
Condition 2: 8 Hour
Replicate 10.70346131340152
Replicate 20.56828760480361
Replicate 30.7019959908437
Condition 3: 24 Hour
Replicate 10.55809034144695
Replicate 21.1941521388268
Replicate 30.58044741711109


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_172241.p1 GENE.R_Transcript_172241~~R_Transcript_172241.p1 ORF type:5prime_partial len:905 (+),score=156.96,NB-ARC|PF00931.18|5.5e-60,LRR_8|PF13855.2|5e+03,LRR_8|PF13855.2|7.3e-06,LRR_8|PF13855.2|0.3,LRR_8|PF13855.2|1.9e+03,LRR_8|PF13855.2|0.053,LRR_8|PF13855.2|95,Arch_ATPase|PF01637.14|2.7e+02,Arch_ATPase|PF01637.14|7.6e-06,LRR_4|PF12799.3|0.44,LRR_4|PF12799.3|0.049,LRR_4|PF12799.3|8.5e+02,LRR_4|PF12799.3|87,LRR_4|PF12799.3|16,LRR_4|PF12799.3|1,AAA_14|PF13173.2|1.4e+03,AAA_14|PF13173.2|4.7e-05 R_Transcript_172241:1-2715(+)
GTGAGTATTGCCGTAATTATAAAGAATCTACATGACTTGTTACAAGCAGAGGCCAAATTATTAGGCGACCTTCCAAAACAAATTAGGTCGATTTCGGATGAATTACGGAGCATCAAAGCTGTATTAAAGGATGCCGATGATCAAGCTGAAGGTAATAATACTGTCAAGGAGTGGCTTAAGCAAGTAAGAGAAGTTGCCTGGAAGATTGAGGATGCCATTGATGATTACTTTCGGCTTATTAAACAGAAAGAACCTCAGCAGGTAAGTTTCGTTGACAAGTGTACTGATCTTGTGGTGCACTGGAAAGCCAAGCATAAGTTAGCTTCAACTGTCAAAGAAATAGAAGTCCAGGTTCAGAAAATCAGTGACAGAAGGAACAGGTACCAATTTACCTCTACTAGTACAGAGCAAGTCAGCCATCATGAGTACAGGGATGAACAGGGAGTTTACTCCCTCTACATGGATATGGATGATGATTCTGAGCTTGTTGGGATAGAGAAACAGAAGGAAGACATGATTAAATTTTGTAAAGAATCATCACACGGCCGTGTGATAGCTGTGGTAGGCATGGGTGGGCTTGGGAAAACCACCCTTGTGAGGGAAGTGTATAAAGAAGCATGGAAAGACTTTGATCATTTTGCCTGGATTGCAGTTTCCCGTTCTAATTTCAAAAGCTTGGATATCCTAAAAAGCATATACAAGCAATTTCTTGACACTCCCGGCCATGTCAATGACAAACTTCAGCAAGTCGACAAATTTCAGGATATTGATTCTGTTACTAAGGATTTGAAGGACTACTTGGAGCAAAACAGATCAATGAGGTACTTAGTTGTCCTAGATGATGTTTGGGAAGGTTCTGAACAGTTGGTGACGGACATGAAAGTTGCTTTACCTATTCGTCCCAATGATAGCAGTAGAATATTGTTGACAACGCGCAACAAAGATGTTGCTGAGTATTGGACGACTAATTTAGGTGGTCGCATATATGAGCAACTACAGCCATTGCCTTTCGATGAAGCATGGCATCTATTTTGCAAGAAATTGTTCGGAGAGAACAATTGCCCTCGAGATTTGGAGGAGTTGTCATACGAGATTGTAATGAAATTTGATGGATTGCCACTTGCAATCGTAGCTGTAGCAGGACTTTTATCCAATAAAACGAAGGTTGTTCTGGAGTGGAAACAGGTACATGATAGGCTTAGCTCCGAGTTTGGGGGAAATTCTCACTTGCTAATTAGATGCACAAGAATTCTACTATTGAGCTATCAAGAGTTACCATACCATCTTAAGCCTTGTTTCTTGTACTTTGGCTTGCTTCCTGAAGATTACTCAATTCAAGGCATGAGGCTAGTTCGCCTTTGGATAGCAGAGGGTTTCATTCCTCATACAAGAGATAGAACAGTTGAGGAGGTGGCTCAAGAATATTTGGTTGCACTTGTTAAGAGAAATTTGGTTCAAGTTTCTGAAAAAGATTCAACCGGAAGGAGTAGGAGCTTCCATATACATGATCTCTTGCGCGAGCTAATTCACTCAAAGCTGGAAGACATTGGTTTCTCTAAAGTGTTGTCAAAGGACAACAACAACAACAACAACAACAACAACTACTCTCATTTTCGACGACTGTCCATCCATGATAGTAGCTGCTTGGTCAACCTAATTAAGCCTACAGGCAACATCCATTCAGTCCTTTCATTTGATGGCAAAAGCCAAAGCATGTTGCCTAGCTGGTTAAACACCCAACCAAAATATTTTCGCTTTTTGAGAATTCTTGACCTTCAAGATGCTCCAATTGATCAAATCCCCAAGGATTTGGGAAATTTGTACCATCTTAAGTATCTGAGTTTGAGAAATACCAAAGTCAAGAAGCTCCCAAACTCAATTGGAAAGCTAGTAAACCTACAAACACTAGATATCAAACAGACTCGGGTCTCTGAGCTACCAAGAGAAATAAATCAACTTCACAAGCTACGCCACCTTCTTGCATATGTTTACAACCCATTTGAGTTTCCTTTCTGTGTCGAAACTACAAAGATACCAGATGGATTTCCTGGAAACTTGAAGGAGTTGCAAAAGTTAGCATTTGTGGATGCAAGTTCATCATCAAGCCTATTGTGTGAGTTGAGAAATGTGAAACAGTTAAAAAGGTTGGGAATCACAAGGCTTAAGGAACAAGATGGGAGAGCTCTTTGTGACGCGGTCAAGGAGATGAAAGATCTCAAGGCTCTTCTTATATACGCAGTTGGAAGAGACGAATTCCTAGATCTAAAGTTCCACAAAGAAGCTCCAGATTGTCTAGAACGCCTCTCCTTAACAGGGCGCTTAGAGGCATTGCCATACTGGATAACAAATCTAAGAAGCTTAAGCAAGTTGACTCTTAGATGTTCATGGCTAAAGGATGATCCTGCAAAAATGCTTCAAGGACTCCCAAATTTGCTGTCACTTGAGCTGTATCAAACATATGATGGTGAAAGGTTGGATTTCGGAGACAATGGATTTCCGAATCTAAAGGTGTTGAATCTTTATCACTTGTACAATCTCAAGTTCATAGTAGGAGCTCTCCCTCTTCTCCAACATTTGAGATGCTGCAATTGTCCCATGCTGAAAGACTTGCCACCTCATATCAATAGGAGAATTGCTCAAGGCTATATATCATTCGTGAAGATCAGAAATGGTGATATGTTAGAGGAGAGAAAAGAGAAGCAGAGTAGCATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_172241.p1 GENE.R_Transcript_172241~~R_Transcript_172241.p1 ORF type:5prime_partial len:905 (+),score=156.96,NB-ARC|PF00931.18|5.5e-60,LRR_8|PF13855.2|5e+03,LRR_8|PF13855.2|7.3e-06,LRR_8|PF13855.2|0.3,LRR_8|PF13855.2|1.9e+03,LRR_8|PF13855.2|0.053,LRR_8|PF13855.2|95,Arch_ATPase|PF01637.14|2.7e+02,Arch_ATPase|PF01637.14|7.6e-06,LRR_4|PF12799.3|0.44,LRR_4|PF12799.3|0.049,LRR_4|PF12799.3|8.5e+02,LRR_4|PF12799.3|87,LRR_4|PF12799.3|16,LRR_4|PF12799.3|1,AAA_14|PF13173.2|1.4e+03,AAA_14|PF13173.2|4.7e-05 R_Transcript_172241:1-2715(+)
VSIAVIIKNLHDLLQAEAKLLGDLPKQIRSISDELRSIKAVLKDADDQAEGNNTVKEWLKQVREVAWKIEDAIDDYFRLIKQKEPQQVSFVDKCTDLVVHWKAKHKLASTVKEIEVQVQKISDRRNRYQFTSTSTEQVSHHEYRDEQGVYSLYMDMDDDSELVGIEKQKEDMIKFCKESSHGRVIAVVGMGGLGKTTLVREVYKEAWKDFDHFAWIAVSRSNFKSLDILKSIYKQFLDTPGHVNDKLQQVDKFQDIDSVTKDLKDYLEQNRSMRYLVVLDDVWEGSEQLVTDMKVALPIRPNDSSRILLTTRNKDVAEYWTTNLGGRIYEQLQPLPFDEAWHLFCKKLFGENNCPRDLEELSYEIVMKFDGLPLAIVAVAGLLSNKTKVVLEWKQVHDRLSSEFGGNSHLLIRCTRILLLSYQELPYHLKPCFLYFGLLPEDYSIQGMRLVRLWIAEGFIPHTRDRTVEEVAQEYLVALVKRNLVQVSEKDSTGRSRSFHIHDLLRELIHSKLEDIGFSKVLSKDNNNNNNNNNYSHFRRLSIHDSSCLVNLIKPTGNIHSVLSFDGKSQSMLPSWLNTQPKYFRFLRILDLQDAPIDQIPKDLGNLYHLKYLSLRNTKVKKLPNSIGKLVNLQTLDIKQTRVSELPREINQLHKLRHLLAYVYNPFEFPFCVETTKIPDGFPGNLKELQKLAFVDASSSSSLLCELRNVKQLKRLGITRLKEQDGRALCDAVKEMKDLKALLIYAVGRDEFLDLKFHKEAPDCLERLSLTGRLEALPYWITNLRSLSKLTLRCSWLKDDPAKMLQGLPNLLSLELYQTYDGERLDFGDNGFPNLKVLNLYHLYNLKFIVGALPLLQHLRCCNCPMLKDLPPHINRRIAQGYISFVKIRNGDMLEERKEKQSSI*

Click here to download the sequence:
Link to NCBI Protein BLAST