Transcript Information: R_Transcript_172242.p1


Annotated TAIR IDAT3G19870.1
Annotated Gene Nameunknown protein; Has 84 Blast hits to 64 proteins in 35 species: Archae - 0; Bacteria - 0; Metazoa - 31; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:6907481-6911115 | Forward length=1090
E-Value6E-38
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.7894801526507
Replicate 27.7565950582502
Replicate 38.0246532980152
Condition 2: 8 Hour
Replicate 17.1742024686196
Replicate 25.2697619625724
Replicate 39.4804590501384
Condition 3: 24 Hour
Replicate 18.3350000763002
Replicate 27.8668439354925
Replicate 310.177085618748


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_172242.p1 GENE.R_Transcript_172242~~R_Transcript_172242.p1 ORF type:5prime_partial len:157 (-),score=25.41 R_Transcript_172242:154-624(-)
TTTTCACTGAAAGGTGGCAAGGGGTTTGCAGGAATATATGGAACACAATCAGTGAAGCTGCTTGAACTTCCTGCGAACTTGGCAATTCGTGTCATTGAGCGGTATTTAGCCCCTTTCGTTGTCAGCGTGATTGGTGCACCTCTAGTAGAGATGGTGAAGGAACAAGGTTTTATTAAGGATGTCATGTGGATGTATGTGTTGTCAGATTCTGCTGATGAGAACCCCGTCACTAATTCGGATGGAGGCCCACTCTACCTGACATACTGTGAAAATGGAGACAATAGAGTCAGTAAGGTTGACATTGGCAAGATAAATATGGGTCGCTTTCTTGTGTTAATATTTCTGCCACCTCGATATCATCTCCTTTTCCGGATGGAAGTTTCTGATGTTTCCACATTAGTTCGAATCAGAACTGACCACTGGCCGTGCTTAGCCTATGTTGATGAATATCTAGAAGCTCTCTTTTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_172242.p1 GENE.R_Transcript_172242~~R_Transcript_172242.p1 ORF type:5prime_partial len:157 (-),score=25.41 R_Transcript_172242:154-624(-)
FSLKGGKGFAGIYGTQSVKLLELPANLAIRVIERYLAPFVVSVIGAPLVEMVKEQGFIKDVMWMYVLSDSADENPVTNSDGGPLYLTYCENGDNRVSKVDIGKINMGRFLVLIFLPPRYHLLFRMEVSDVSTLVRIRTDHWPCLAYVDEYLEALFS*

Click here to download the sequence:
Link to NCBI Protein BLAST