Transcript Information: R_Transcript_172274.p1


Annotated TAIR IDAT5G60870.1
Annotated Gene NameRegulator of chromosome condensation (RCC1) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:24485788-24487771 | Reverse length=445
E-Value6E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.759168516411
Replicate 22.6855733090614
Replicate 33.196288966905
Condition 2: 8 Hour
Replicate 12.2777548788135
Replicate 22.86011279364
Replicate 32.1106523977194
Condition 3: 24 Hour
Replicate 15.3390249366754
Replicate 22.5645649872764
Replicate 32.5450819403369


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_172274.p1 GENE.R_Transcript_172274~~R_Transcript_172274.p1 ORF type:5prime_partial len:86 (-),score=25.60,RCC1|PF00415.14|1.9e-07,RCC1_2|PF13540.2|1.5,RCC1_2|PF13540.2|0.0066 R_Transcript_172274:102-359(-)
GTGAACAACAAAGGTTATCTTTCTGACATAGGTGAAACTGCATATTTGAAAACAGAGACAGGGAAGTTATACATGTGGGGAAACGCAAAGGACTCTCAACTAGGGGTTCCTGGGCTGCCTGAGATACAGTCTTCGCCTGTTGAAGTGAACTTTCTGATGGAAGATGATGGTTTGGGGCCACCCAGTGTTCGATCTGTTGCCATTGGTGCATCTCATGCCATGTCTTTGGTTTCACGAGGTGAAGCAGCTAGGAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_172274.p1 GENE.R_Transcript_172274~~R_Transcript_172274.p1 ORF type:5prime_partial len:86 (-),score=25.60,RCC1|PF00415.14|1.9e-07,RCC1_2|PF13540.2|1.5,RCC1_2|PF13540.2|0.0066 R_Transcript_172274:102-359(-)
VNNKGYLSDIGETAYLKTETGKLYMWGNAKDSQLGVPGLPEIQSSPVEVNFLMEDDGLGPPSVRSVAIGASHAMSLVSRGEAARK*

Click here to download the sequence:
Link to NCBI Protein BLAST