Transcript Information: R_Transcript_172646.p1


Annotated TAIR IDAT1G11350.1
Annotated Gene NameS-domain-1 13
Annotated Gene Symbol(s)CBRLK1, SD1-13, RKS2
Annotation TypeHomolog
Chromosome Positionchr1:3817725-3820752 | Reverse length=830
E-Value3E-79
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.30421601591198
Replicate 20
Replicate 30.25451930662392
Condition 2: 8 Hour
Replicate 10.20404887456038
Replicate 20.3105678033498
Replicate 30.10084228122437
Condition 3: 24 Hour
Replicate 10.25508674697449
Replicate 20.18379382408814
Replicate 30.18239753905748


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_172646.p1 GENE.R_Transcript_172646~~R_Transcript_172646.p1 ORF type:3prime_partial len:360 (+),score=52.36,B_lectin|PF01453.20|3.3e-30,S_locus_glycop|PF00954.16|2.2e+03,S_locus_glycop|PF00954.16|5.1e+03,S_locus_glycop|PF00954.16|8.8e-29 R_Transcript_172646:201-1277(+)
ATGAATTATGTGTGTGTACATGTTCTGTTCTTACTAAGTATTGGTTCAGAATTCTGTTCTGCTGTAGATAATTTTACCTCAGCTAAGTTTCTGAAAGACCCAGAATCATTAGTCTCAAATAACAGTAACTTCAGACTAGGATTTTTCAGCCCTCCGAATTCGACAAATCGTTATGTAGGGATCTGGTATTATAAACCTTCTGTAATGGAGGTTGTATGGGTAGCTAACAGGAACAATCCCCTCACTGATTCATCTGGTGTGCTAGAGTTATCAGATGATGGAAATCTCCAACTCTCTAATTCAAAGAATCAGACCCTTTGGTCATCAAATGTCACACATTCCGTCACTCGGTTTTCAGTTGCACAACTTCTGGATACTGGTAACCTGGTTGTGCAAGGATTTGTATCAGATACAGATCAAGTTAATGGAACAGTCATATGGCAGAGTTTTCAGAATCCTACAGACTCGCTCTTGCCGAATATGAAGATTAATTTATCATACAAGTCTAATTTGTTACATCTCCTGCAGTCTTGGAATAGCCCTTCTGATCCATCTAGTGGGATATTCTCAGCTGGTGCTAATTCTGTCAGCTTGTTTCAGATTGTAGTCTGGGATGGTGATCGCCTGTATTGGAGAAGTGGCCCTTGGAATGGGAACATCTTTGTTGGGACAAGATATCAAAATCTTGGGTATGGTAATATCTTTGTCAATGCTGGGTTTTTGACCCAGGATAATGGAGGAGGAACAGCTTCCCTTGTTTTTGCTGGAGCAGATCCAAATTTGTTTTCACATTATGTGTTAAGCTACGAGGGAACAGTGGCTCAAAAATGGTGGAATAGTAGTAGAAACAACTGGGAAATCGCATGGAAAGCACCAGCTACAGAATGTGATGTTTATGGTAAATGTGGGGAATTTGGCAGCTGCAATCCTTGGAATTCACCGATTTGCAGCTGTTTGAGAGGGTTTGAGCCGAAGAATAGGGACGAATGGAGGCGGGGAAATTGGACAAGTGGGTGTGTAAGAAGAAAGAAACTGGAATGCGAAATTCAAGGGGGAAAAGAAGATGGGTTTCTAAGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_172646.p1 GENE.R_Transcript_172646~~R_Transcript_172646.p1 ORF type:3prime_partial len:360 (+),score=52.36,B_lectin|PF01453.20|3.3e-30,S_locus_glycop|PF00954.16|2.2e+03,S_locus_glycop|PF00954.16|5.1e+03,S_locus_glycop|PF00954.16|8.8e-29 R_Transcript_172646:201-1277(+)
MNYVCVHVLFLLSIGSEFCSAVDNFTSAKFLKDPESLVSNNSNFRLGFFSPPNSTNRYVGIWYYKPSVMEVVWVANRNNPLTDSSGVLELSDDGNLQLSNSKNQTLWSSNVTHSVTRFSVAQLLDTGNLVVQGFVSDTDQVNGTVIWQSFQNPTDSLLPNMKINLSYKSNLLHLLQSWNSPSDPSSGIFSAGANSVSLFQIVVWDGDRLYWRSGPWNGNIFVGTRYQNLGYGNIFVNAGFLTQDNGGGTASLVFAGADPNLFSHYVLSYEGTVAQKWWNSSRNNWEIAWKAPATECDVYGKCGEFGSCNPWNSPICSCLRGFEPKNRDEWRRGNWTSGCVRRKKLECEIQGGKEDGFLR

Click here to download the sequence:
Link to NCBI Protein BLAST