Transcript Information: R_Transcript_172682.p1


Annotated TAIR IDAT4G13540.1
Annotated Gene Nameunknown protein; INVOLVED IN: N-terminal protein myristoylation; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G23930.1); Has 4658 Blast hits to 3455 proteins in 431 species: Archae - 39; Bacteria - 387; Metazoa - 1842; Fungi - 436; Plants - 133; Viruses - 38; Other Eukaryotes - 1783 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:7869896-7870604 | Forward length=210
E-Value5.2E-37
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 124.695182468149
Replicate 215.808979136977
Replicate 320.032166603694
Condition 2: 8 Hour
Replicate 116.996070963382
Replicate 214.994944293501
Replicate 317.155051605934
Condition 3: 24 Hour
Replicate 126.559031890873
Replicate 210.897892628285
Replicate 335.621166451225


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_172682.p1 GENE.R_Transcript_172682~~R_Transcript_172682.p1 ORF type:complete len:255 (-),score=74.83,CALCOCO1|PF07888.7|1.2e-06 R_Transcript_172682:216-980(-)
ATGGGTATATGCATAAGCAGCAACAAAGGGAAGTATGGCTGTGAGGAGCTCACAGACCCCAGGATTTTTATACAGAAGCTGAGGCTCCTACAGCAGGAGATCAATGCAATCCTGAAACAAAGGGAGGAAGACAGTGAGGCTTATGAGAGAGAGATGATGGTGCTCATGTTCAAGGAGGCTGAGTGGAAAAGAGAGAGGAAGAAGCTTCGAGACGAAGTGAAGAAATTGCGAAAGAGCTTGGAGGATAGAGAGGAGAGGATTCAGAAGATGGCGGAGATGAGTGAAAAAGGGTTAACTGAAACTACTAGTAATGCTAGCTTGCCACTAGTAGAGCAAATGAGAGAAGAAAGAGCAAGAAGAGATGAGACTGTAGAGAAGTGGAAAATGTTGTACCTCGCTATCAAGAATGAGCTTGATGATCTGATTCAGAGGACACATCAAGGGACTCTTTATTGGAGAGCAGAAGAAGAAGATTTTATGGAGGAACTACAAAGGGAATTGAAAGCCAAGGATGAGACTATAGAAGCTCTGAAAGCACAAATAGCTTCAATGGAGGATGAGACGTATAAGAGGAAAAGGGAAGTTGACATACTAAGACAGAGCCTGAGAATTATCAGCAGCAAGAACACAACTTCTCCTACAACACCCATTGCTAAGAGCCTCTCCAAACCTTCATTAATGTCTTCAACACCACTTGCTAAGAGCCACTCAAATCCCTCACCGGCTCTTACTAATATGCTTACAGAACTTGCATTTGTAAACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_172682.p1 GENE.R_Transcript_172682~~R_Transcript_172682.p1 ORF type:complete len:255 (-),score=74.83,CALCOCO1|PF07888.7|1.2e-06 R_Transcript_172682:216-980(-)
MGICISSNKGKYGCEELTDPRIFIQKLRLLQQEINAILKQREEDSEAYEREMMVLMFKEAEWKRERKKLRDEVKKLRKSLEDREERIQKMAEMSEKGLTETTSNASLPLVEQMREERARRDETVEKWKMLYLAIKNELDDLIQRTHQGTLYWRAEEEDFMEELQRELKAKDETIEALKAQIASMEDETYKRKREVDILRQSLRIISSKNTTSPTTPIAKSLSKPSLMSSTPLAKSHSNPSPALTNMLTELAFVN*

Click here to download the sequence:
Link to NCBI Protein BLAST