Transcript Information: R_Transcript_172796.p1


Annotated TAIR IDAT2G47485.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G62650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:19486004-19486429 | Forward length=141
E-Value7E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2416980241305
Replicate 20.28566395124215
Replicate 33.7398755259024
Condition 2: 8 Hour
Replicate 12.9982691772137
Replicate 22.4338374793127
Replicate 32.963528264553
Condition 3: 24 Hour
Replicate 11.5617555937214
Replicate 20.75017887382916
Replicate 31.48895950251


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_172796.p1 GENE.R_Transcript_172796~~R_Transcript_172796.p1 ORF type:complete len:147 (+),score=27.41 R_Transcript_172796:129-569(+)
ATGGAAAGAATATCCAGGCCATTCAATGGGAAGAACTACTGGAAAAAGAAAGGGTACAGTCTCCTAGATGGAGCAGGGAGTACCAAGAGGAACATGCAGGTAGTGAAGATCAGCGGCGATGGAAATAACGGATTAACGACAACGAAAAAATTGAGGAGGTTCTGGAGGATCAAAAGAGCTCCGAAATTGAATATAAAGAAGGTGATTTTGTCCCCGAAGAAACTATGGAATAAGTTCAAGAATGGATATGTGAACTTGATGCTAAGGGTGGCGGGTGACGTAGGCCAGGTTAATGGAGGTGGTGACTTTGAGAAGAAGAGAATACCAGGAGCTAGGCAAGTCCAAGTTAAGTACAAAACTAGAGATGACTTTGAGGCAAGGCTTGTTCTTGAGATTTACAAGGCTTTGAGTACTTCCAAGGGCTTGTCCGAGGTTGCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_172796.p1 GENE.R_Transcript_172796~~R_Transcript_172796.p1 ORF type:complete len:147 (+),score=27.41 R_Transcript_172796:129-569(+)
MERISRPFNGKNYWKKKGYSLLDGAGSTKRNMQVVKISGDGNNGLTTTKKLRRFWRIKRAPKLNIKKVILSPKKLWNKFKNGYVNLMLRVAGDVGQVNGGGDFEKKRIPGARQVQVKYKTRDDFEARLVLEIYKALSTSKGLSEVA*

Click here to download the sequence:
Link to NCBI Protein BLAST