Transcript Information: R_Transcript_172888.p1


Annotated TAIR ID
Annotated Gene Name
Annotated Gene Symbol(s)
Annotation Type
Chromosome Position
E-Value
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4294487494659
Replicate 20.63241868723789
Replicate 32.0698859273632
Condition 2: 8 Hour
Replicate 10
Replicate 21.0776328598162
Replicate 30.87477641544034
Condition 3: 24 Hour
Replicate 10.41490013062116
Replicate 20.39858901609477
Replicate 31.0548291415372


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_172888.p1 GENE.R_Transcript_172888~~R_Transcript_172888.p1 ORF type:5prime_partial len:166 (+),score=27.74 R_Transcript_172888:3-500(+)
ACTTTTTTCCAAATTTTCCTGACAATTTCTCAATCTTACGATTTCCTCAAAATGCCACGAAACATAGGGGTTGAATTCAAGTGCAAAACGGGCGTGTCATGCATAGAAGGAGAATACACAATGGTGACAATCAACTACAAGGACAAAATGGAGTACGGAACACGGGCAAAGGGGGCAGTCAAAGAAGCTTCTGTGACCTTCAAAGAGGAGGCTGATGTTCTGATGCCGGTGACAGCTAAGTATGATTCAGAAGGGTTTAAGAGATCATGGGGAATTGTTGAAGATTGGCTTAAGTATATGGGTGTTGATCCTATTGATATTATACTTAACACCAAGTGTTATCGTACCAAGTTGAGTTGTGTGCCTCAGGCTTTGTATGTTGAGTTTGATCTTACTCTTGTTGATGCCTTTGGGTTCTCTCCTAGCCTCCGGCGGCCGAGATCCGGCGACGACTACGACGATGATCATGATGGTGGTGCTAAGAGGATCAAGGGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_172888.p1 GENE.R_Transcript_172888~~R_Transcript_172888.p1 ORF type:5prime_partial len:166 (+),score=27.74 R_Transcript_172888:3-500(+)
TFFQIFLTISQSYDFLKMPRNIGVEFKCKTGVSCIEGEYTMVTINYKDKMEYGTRAKGAVKEASVTFKEEADVLMPVTAKYDSEGFKRSWGIVEDWLKYMGVDPIDIILNTKCYRTKLSCVPQALYVEFDLTLVDAFGFSPSLRRPRSGDDYDDDHDGGAKRIKG*

Click here to download the sequence:
Link to NCBI Protein BLAST