Transcript Information: R_Transcript_17305.p1


Annotated TAIR IDAT3G07880.1
Annotated Gene NameImmunoglobulin E-set superfamily protein
Annotated Gene Symbol(s)SCN1
Annotation TypeHomolog
Chromosome Positionchr3:2514175-2515544 | Forward length=240
E-Value4E-45
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 137.67411141054
Replicate 229.310835381152
Replicate 337.200541856152
Condition 2: 8 Hour
Replicate 140.744479272216
Replicate 256.438865767152
Replicate 364.692340251059
Condition 3: 24 Hour
Replicate 142.058702841154
Replicate 239.964129109726
Replicate 348.765806042407


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_17305.p1 GENE.R_Transcript_17305~~R_Transcript_17305.p1 ORF type:complete len:250 (+),score=55.35,Rho_GDI|PF02115.13|8.7e-52 R_Transcript_17305:1005-1754(+)
ATGCCACTCGCTGTTGAAGCTGTTTCTGGTGCTCCTAACATGAAGTTCGAAGAGCAGAAGAGCAGCAAGATAGATAACTTCAACTGCGAGTTCAAGGAAAGAGCTGATATTGGTAAGGATTTGATCAAGGAAATCAGCGAAAAACCTGTTGATCATGACAAATTAGCTGAAACTACAGTGCAGGGAGATACTGAAGCCTGCTTGAAGTTTGATGAGCATGTCGAAAAGTATAAGGATTCTGTAATGAATGATGATGAAAGCTTAACCAATTGCAAGCAGCAAGAAGTTCCTGCAAGTATCGACACATCCGCTGTCAGAGAAAACAAAGGACCAGAGGTGAAGATATTGAGCCTCACAGTTGTTTCTCCTGGCCGTCAAGATGTTGTGTTGCCAATTCCATTTCCTGCAACTACTTCCAAGTCCACACTGTTTACCCTCAAGGAAGGAAGCAAATACCGAATCAAGTTTCATTTCACCGTGTCTAACAACACTGTTTCTGACCTCAAATACACCTACATGGTTTGGAAGGCTGGTGTCAGAGTACACCAGACAAAGAAGATGATGGGTGCATTCAGCCCGCGGCAAGAACCCTACATATTCGAACTAGAAGAAGGAACTACTCCTACAGGATTTTTTGCAAGAGGCCCCTTCTTGGTTAAATCTAAGTTTGCGGATGATGAAAACTGTTACTTAGATACCACTTACTACTTTGATATCAGAAAGGACTGGGGAGCTAGAGAAAAGTGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_17305.p1 GENE.R_Transcript_17305~~R_Transcript_17305.p1 ORF type:complete len:250 (+),score=55.35,Rho_GDI|PF02115.13|8.7e-52 R_Transcript_17305:1005-1754(+)
MPLAVEAVSGAPNMKFEEQKSSKIDNFNCEFKERADIGKDLIKEISEKPVDHDKLAETTVQGDTEACLKFDEHVEKYKDSVMNDDESLTNCKQQEVPASIDTSAVRENKGPEVKILSLTVVSPGRQDVVLPIPFPATTSKSTLFTLKEGSKYRIKFHFTVSNNTVSDLKYTYMVWKAGVRVHQTKKMMGAFSPRQEPYIFELEEGTTPTGFFARGPFLVKSKFADDENCYLDTTYYFDIRKDWGAREKC*

Click here to download the sequence:
Link to NCBI Protein BLAST