Transcript Information: R_Transcript_173068.p1


Annotated TAIR IDAT4G19490.1
Annotated Gene NameVPS54
Annotated Gene Symbol(s)ATVPS54, VPS54
Annotation TypeHomolog
Chromosome Positionchr4:10616017-10622934 | Forward length=1034
E-Value4E-45
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.55649271203411
Replicate 20.2560524441012
Replicate 30.55870091697933
Condition 2: 8 Hour
Replicate 10.29860810911275
Replicate 20.8180810429702
Replicate 31.32816663076
Condition 3: 24 Hour
Replicate 10.55994651774888
Replicate 21.2103495732634
Replicate 30.66730806972248


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_173068.p1 GENE.R_Transcript_173068~~R_Transcript_173068.p1 ORF type:internal len:164 (-),score=47.57 R_Transcript_173068:1-489(-)
CAACAGTTAGGGGATTTGAATGTTAAGATTGTGGATGGTTGTAAGAGGATTAGAGAACTGAAGGAGACTATTAGGCTTTTGGATAATGATATTGTTGGCTCTGCTAGACAGATTCAAGAGTTTAGTTCTATGAGGAATAACTTGTTGGCTCTTCAACAGAAGTTGCGGCTTATCTTGTATGTTAATCAGGCTCTCTCCGCCCTCAAACTGGATGGTGACGAGCTGACAGGTCTGCACTGCTTTCGTCATCTTCGTGACCATGTTGCTACATCAATGGAATCCATAAACAGCATTCTTTCAGCAGAATTTATGCATGCATCTTTACATGATGCTGTGGATGTGGATGCTGTAATTGTATCAAAAGCGAAAGAAAGAGCATCTGCACCCAGTAATGGAAGACTTGATGATGTGAAGTTGGATGAAGAAGAAATCTCTAATTACCGAGATTGTCTTCTGCCAATAATAATTGGATTGCTTAGAACAGCAAAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_173068.p1 GENE.R_Transcript_173068~~R_Transcript_173068.p1 ORF type:internal len:164 (-),score=47.57 R_Transcript_173068:1-489(-)
QQLGDLNVKIVDGCKRIRELKETIRLLDNDIVGSARQIQEFSSMRNNLLALQQKLRLILYVNQALSALKLDGDELTGLHCFRHLRDHVATSMESINSILSAEFMHASLHDAVDVDAVIVSKAKERASAPSNGRLDDVKLDEEEISNYRDCLLPIIIGLLRTAK

Click here to download the sequence:
Link to NCBI Protein BLAST