Transcript Information: R_Transcript_173297.p1


Annotated TAIR IDAT4G36020.1
Annotated Gene Namecold shock domain protein 1
Annotated Gene Symbol(s)CSDP1
Annotation TypeHomolog
Chromosome Positionchr4:17043443-17044342 | Reverse length=299
E-Value8E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.97534905864909
Replicate 21.1219397169014
Replicate 30.87430296168521
Condition 2: 8 Hour
Replicate 10.74765999838917
Replicate 20.85346877256433
Replicate 31.6627429575927
Condition 3: 24 Hour
Replicate 11.2267530579689
Replicate 21.5152467940091
Replicate 30.50124514550147


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_173297.p1 GENE.R_Transcript_173297~~R_Transcript_173297.p1 ORF type:3prime_partial len:131 (+),score=24.02,CSD|PF00313.18|1.7e-22,zf-CCHC|PF00098.19|7.2e-07 R_Transcript_173297:185-574(+)
ATGTCGGACGGTGGTGGTGGTGGTGGAAAGAAATCGAGGGGGACAGTGAAGTGGTTTAACGGGTGGAAGGGATTTGGGTTCATAACCCCAGACGAGGAAGGGTCCGATGATCTGTTTGTCCATCAGACTTCAATCCGATCCGAAGGGTTTCGGACCCTCCAAGAAGGGAAGCGGGTGGATTTCGAGGCTGATGTTAGCGAGGATGGCCGTACGAGGGCATCCAATGTGGTCCCCTTTAGAAGCTCAGGCTCAGGTGGGGGCCGTGGGGTACGTGGAAGAGGAAGAAACAGGGGTTTAGACTGCTATAATTGTGGAAGGTTGGGTCATTTGGCTAGGGATTGCTATGGTGGAAGAAGGGACTATGATTATTATGTCGATGGTTATGGTGGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_173297.p1 GENE.R_Transcript_173297~~R_Transcript_173297.p1 ORF type:3prime_partial len:131 (+),score=24.02,CSD|PF00313.18|1.7e-22,zf-CCHC|PF00098.19|7.2e-07 R_Transcript_173297:185-574(+)
MSDGGGGGGKKSRGTVKWFNGWKGFGFITPDEEGSDDLFVHQTSIRSEGFRTLQEGKRVDFEADVSEDGRTRASNVVPFRSSGSGGGRGVRGRGRNRGLDCYNCGRLGHLARDCYGGRRDYDYYVDGYGG

Click here to download the sequence:
Link to NCBI Protein BLAST