Transcript Information: R_Transcript_17332.p3


Annotated TAIR IDAT5G08290.1
Annotated Gene NamemRNA splicing factor, thioredoxin-like U5 snRNP
Annotated Gene Symbol(s)YLS8
Annotation TypeOrtholog
Chromosome Positionchr5:2666043-2666936 | Forward length=142
E-Value1.8E-104
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1399.01227933182
Replicate 2420.66014470415
Replicate 3441.47530639857
Condition 2: 8 Hour
Replicate 1413.17756725666
Replicate 2481.93173310863
Replicate 3490.22042109045
Condition 3: 24 Hour
Replicate 1390.60381108395
Replicate 2393.29307811869
Replicate 3389.69297994993


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_17332.p3 GENE.R_Transcript_17332~~R_Transcript_17332.p3 ORF type:complete len:143 (+),score=19.70,DIM1|PF02966.12|2.9e-66 R_Transcript_17332:3950-4378(+)
ATGTCGTACCTGCTACCTCACCTTCACTCAGGATGGGCAGTGGATCAGGCCATTCTCGCCGAAGAAGAACGTCTCGTCATCATTCGCTTTGGTCATGATTGGGACGAAACTTGCATGCAGATGGATGAAGTATTAGCTTCAGTAGCAGAAACAACAAAGAATTTCGCTGTGATATACCTTGTAGACATAACTGAGGTGCCTGATTTCAACACGATGTACGAGCTCTATGACCCATCCACAGTTATGTTCTTTTTCAGGAACAAGCATATAATGATAGACCTTGGTACTGGGAACAACAATAAGATCAATTGGGCCCTCAAGGACAAGCAGGAGTTCATTGACATTGTTGAGACTGTTTATCGTGGAGCAAGGAAGGGTCGAGGTCTTGTGATTGCACCAAAAGATTACTCCACTAAGTACCGCTATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_17332.p3 GENE.R_Transcript_17332~~R_Transcript_17332.p3 ORF type:complete len:143 (+),score=19.70,DIM1|PF02966.12|2.9e-66 R_Transcript_17332:3950-4378(+)
MSYLLPHLHSGWAVDQAILAEEERLVIIRFGHDWDETCMQMDEVLASVAETTKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY*

Click here to download the sequence:
Link to NCBI Protein BLAST