Transcript Information: R_Transcript_17335.p1


Annotated TAIR IDAT5G09300.1
Annotated Gene NameThiamin diphosphate-binding fold (THDP-binding) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:2884282-2886797 | Reverse length=472
E-Value6.7E-211
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 190.469551288015
Replicate 267.780588065892
Replicate 3101.74963733063
Condition 2: 8 Hour
Replicate 1102.66791090951
Replicate 2118.62401424878
Replicate 3104.31527265243
Condition 3: 24 Hour
Replicate 177.065834220799
Replicate 254.406022449992
Replicate 370.385772333383


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_17335.p1 GENE.R_Transcript_17335~~R_Transcript_17335.p1 ORF type:complete len:482 (+),score=86.08,E1_dh|PF00676.16|1.8e-91 R_Transcript_17335:327-1772(+)
ATGGCGATGGCATCTTCAATCAGACAAAGAGCTCTAGTTTACAAACTAAGATCAAAACTGGGTTCAATGAAAATCTTTCATCAACATAATTACATGGGCTCTTCAATGACCCACCAAATTTATCCCTCGTTTTCAGAACAAATGCTCACAAACCCAGATGTAATTTCAAGTAATTCGGCCTTGGCTACCCATTTTGTTTCGAGACATCACAAATCAACAGTGGCCCAGAAAAAAGACCTGGATTCTTCTTCTTGTGGCAGCAATGAGACCTTAGATTTTCCTGGCGGTAAGGTTGGATTGACTTCGCAAATGAGGTTCATTTCAGAAACCAACAGTAGCAGGGTTCAATGCTACAGGGTTCTTGACAATAATGGTCAGCTTGGTGGAGAATGTACAGAGGTGGGTGAGGAACTTGCTGCCAAAATGTACAAAAACATGGTTACCTTACGAGCTATGGATACTGTATTCTATGAAGCTCAAAGACAAGGGAGAATCTCATTCTATGCCACTAGCACTGGCGAAGAAGCCATCCATATTGCTTCAGCAGCTGCACTCAGCATCGATGATCTCATTGTCCCTCAGTACAGGGAGCAAGGGGTGCTGTTGTGGCGTGGTTTCCCTCTGCAAGATTTTGCAAACCAATGCTTTAGCAACAAAGATGATTACGGGAAAGGCAGGCAGATGACTGTGCACTATGGGTCTAACAAACTCAATTACTTAACTGTGGCCGCAACTGTTGCCACACAAATTCCCCATGCGGTTGGTGCTGCATACTCTTTGAAAATGGACGATAAAGATGCATGCACAGTTGCTTACTTTGGCGATGGCGGCACCAGTACAGGAGATTTCCATGCTGCTCTAAACTTTGCTGCTGTCCTGGAGGTCCCCATCCTATTTTTCTGTCGAAACAATGGTTGGGCCATTAGTACTCCTGTTTCAGACCAGATGAGAAGCGATGGAGTAGTTGTTCGAGGGCAAGCTTATGGAATTCGAAGCATCAGGATTGATGGCAACGATGCTCTTGCAATTTACAATGCAGTGCATGAAGCCCGCAGAATAGCTGTAACTGAGAAAAGACCTGTCTTGATTGAAGCGCTAACCTATCGAGCCGGTCACCACTCTACTTCAGATGATTCCACAAGGTATCGTTCAGTTGAGGAAATCGAGTTGTGGAGAAAGGAACGAGACCCTCTGACGAGATTTAGGAAATGGATCGAGAGAAATGGGTGGTGGAATGATGAGATGGAATCAGAGTTGCAAAGCAGTGTAAGGGAGCAGCAAATGCACGCAATTCAAGTAGCGGAGAAACTTGAAAAGCCATCAGTTGCAGATCTTTTCACTGATGTCTACAATGTTCTGCCGCCAAACCTATGCGAACAAGAAAGATCTTTAAGGGAGACGATAAAAGCGCACCCAGAAGACTACCCATCTAATGTTCCTGTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_17335.p1 GENE.R_Transcript_17335~~R_Transcript_17335.p1 ORF type:complete len:482 (+),score=86.08,E1_dh|PF00676.16|1.8e-91 R_Transcript_17335:327-1772(+)
MAMASSIRQRALVYKLRSKLGSMKIFHQHNYMGSSMTHQIYPSFSEQMLTNPDVISSNSALATHFVSRHHKSTVAQKKDLDSSSCGSNETLDFPGGKVGLTSQMRFISETNSSRVQCYRVLDNNGQLGGECTEVGEELAAKMYKNMVTLRAMDTVFYEAQRQGRISFYATSTGEEAIHIASAAALSIDDLIVPQYREQGVLLWRGFPLQDFANQCFSNKDDYGKGRQMTVHYGSNKLNYLTVAATVATQIPHAVGAAYSLKMDDKDACTVAYFGDGGTSTGDFHAALNFAAVLEVPILFFCRNNGWAISTPVSDQMRSDGVVVRGQAYGIRSIRIDGNDALAIYNAVHEARRIAVTEKRPVLIEALTYRAGHHSTSDDSTRYRSVEEIELWRKERDPLTRFRKWIERNGWWNDEMESELQSSVREQQMHAIQVAEKLEKPSVADLFTDVYNVLPPNLCEQERSLRETIKAHPEDYPSNVPV*

Click here to download the sequence:
Link to NCBI Protein BLAST