Transcript Information: R_Transcript_17339.p1


Annotated TAIR IDAT5G09300.1
Annotated Gene NameThiamin diphosphate-binding fold (THDP-binding) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:2884282-2886797 | Reverse length=472
E-Value7.6E-93
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.4096178133017
Replicate 22.9103782755265
Replicate 37.2575802284839
Condition 2: 8 Hour
Replicate 17.5154634986594
Replicate 213.283692182883
Replicate 315.096389030817
Condition 3: 24 Hour
Replicate 17.0464556837508
Replicate 25.0224846978542
Replicate 39.2101727642885


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_17339.p1 GENE.R_Transcript_17339~~R_Transcript_17339.p1 ORF type:complete len:202 (+),score=43.92,E1_dh|PF00676.16|6.5e-30 R_Transcript_17339:1801-2406(+)
ATGAGGTTCATTTCAGAAACCAACAGTAGCAGGGTTCAATGCTACAGGGTTCTTGACAATAATGGTCAGCTTGGTGGAGAATGTACAGAGGTGGGTGAGGAACTTGCTGCCAAAATGTACAAAAACATGGTTACCTTACGAGCTATGGATACTGTATTCTATGAAGCTCAAAGACAAGGGAGAATCTCATTCTATGCCACTAGCACTGGCGAAGAAGCCATCCATATTGCTTCAGCAGCTGCACTCAGCATCGATGATCTCATTGTCCCTCAGTACAGGGAGCAAGGGGTGCTGTTGTGGCGTGGTTTCCCTCTGCAAGATTTTGCAAACCAATGCTTTAGCAACAAAGATGATTACGGGAAAGGCAGGCAGATGACTGTGCACTATGGGTCTAACAAACTCAATTACTTAACTGTGGCCGCAACTGTTGCCACACAAATTCCCCATGCGGTTGGTGCTGCATACTCTTTGAAAATGGACGATAAAGATGCATGCACAGTTGCTTACTTTGGCGATGGCGGCACCAGTACAGTAAGTTTGACTATTGATAGCTTCCTTTTGCCTGTTCTAACTGTGAGATTTTCAGTTTCTGTGGATGTTTTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_17339.p1 GENE.R_Transcript_17339~~R_Transcript_17339.p1 ORF type:complete len:202 (+),score=43.92,E1_dh|PF00676.16|6.5e-30 R_Transcript_17339:1801-2406(+)
MRFISETNSSRVQCYRVLDNNGQLGGECTEVGEELAAKMYKNMVTLRAMDTVFYEAQRQGRISFYATSTGEEAIHIASAAALSIDDLIVPQYREQGVLLWRGFPLQDFANQCFSNKDDYGKGRQMTVHYGSNKLNYLTVAATVATQIPHAVGAAYSLKMDDKDACTVAYFGDGGTSTVSLTIDSFLLPVLTVRFSVSVDVL*

Click here to download the sequence:
Link to NCBI Protein BLAST