Transcript Information: R_Transcript_17346.p2


Annotated TAIR IDAT5G09300.1
Annotated Gene NameThiamin diphosphate-binding fold (THDP-binding) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:2884282-2886797 | Reverse length=472
E-Value6.4E-82
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 170.858404605116
Replicate 2123.38275413173
Replicate 385.449852605872
Condition 2: 8 Hour
Replicate 1104.13370654531
Replicate 2132.40657000343
Replicate 385.557310733172
Condition 3: 24 Hour
Replicate 155.459871392768
Replicate 250.305815222328
Replicate 348.325100797475


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_17346.p2 GENE.R_Transcript_17346~~R_Transcript_17346.p2 ORF type:complete len:178 (+),score=25.37,E1_dh|PF00676.16|9.5e-38 R_Transcript_17346:2292-2825(+)
ATGCACAGTTGCTTACTTTGGCGATGGCGGCACCAGTACAGCGATGGAGTAGTTGTTCGAGGGCAAGCTTATGGAATTCGAAGCATCAGGATTGATGGCAACGATGCTCTTGCAATTTACAATGCAGTGCATGAAGCCCGCAGAATAGCTGTAACTGAGAAAAGACCTGTCTTGATTGAAGCGCTAACCTATCGAGCCGGTCACCACTCTACTTCAGATGATTCCACAAGGTATCGTTCAGTTGAGGAAATCGAGTTGTGGAGAAAGGAACGAGACCCTCTGACGAGATTTAGGAAATGGATCGAGAGAAATGGGTGGTGGAATGATGAGATGGAATCAGAGTTGCAAAGCAGTGTAAGGGAGCAGCAAATGCACGCAATTCAAGTAGCGGAGAAACTTGAAAAGCCATCAGTTGCAGATCTTTTCACTGATGTCTACAATGTTCTGCCGCCAAACCTATGCGAACAAGAAAGATCTTTAAGGGAGACGATAAAAGCGCACCCAGAAGACTACCCATCTAATGTTCCTGTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_17346.p2 GENE.R_Transcript_17346~~R_Transcript_17346.p2 ORF type:complete len:178 (+),score=25.37,E1_dh|PF00676.16|9.5e-38 R_Transcript_17346:2292-2825(+)
MHSCLLWRWRHQYSDGVVVRGQAYGIRSIRIDGNDALAIYNAVHEARRIAVTEKRPVLIEALTYRAGHHSTSDDSTRYRSVEEIELWRKERDPLTRFRKWIERNGWWNDEMESELQSSVREQQMHAIQVAEKLEKPSVADLFTDVYNVLPPNLCEQERSLRETIKAHPEDYPSNVPV*

Click here to download the sequence:
Link to NCBI Protein BLAST