Transcript Information: R_Transcript_173527.p1


Annotated TAIR IDAT5G66631.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:26596207-26598192 | Forward length=661
E-Value4.6E-205
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.8448628223759
Replicate 21.0932223800216
Replicate 31.4733276861231
Condition 2: 8 Hour
Replicate 11.1624223788126
Replicate 21.9176253952625
Replicate 32.3627670792234
Condition 3: 24 Hour
Replicate 12.250076052945
Replicate 22.9722247815786
Replicate 32.6814952143213


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_173527.p1 GENE.R_Transcript_173527~~R_Transcript_173527.p1 ORF type:complete len:653 (+),score=142.02,PPR_2|PF13041.2|3.4e+02,PPR_2|PF13041.2|3e-06,PPR_2|PF13041.2|1.4e+02,PPR_2|PF13041.2|4.2,PPR_2|PF13041.2|2.8e+03,PPR_2|PF13041.2|1.3e-05,PPR_2|PF13041.2|9.3e-06,PPR_2|PF13041.2|8.5e-09,PPR_3|PF13812.2|1.3e+04,PPR_3|PF13812.2|2.2e+02,PPR_3|PF13812.2|7.4e+03,PPR_3|PF13812.2|5.7,PPR_3|PF13812.2|0.039,PPR_3|PF13812.2|14,PPR_3|PF13812.2|1.7,PPR_3|PF13812.2|0.038,PPR_3|PF13812.2|2.9e+03,PPR_3|PF13812.2|0.39,PPR_3|PF13812.2|0.34,PPR_3|PF13812.2|0.0053,PPR|PF01535.16|24,PPR|PF01535.16|0.061,PPR|PF01535.16|49,PPR|PF01535.16|0.091,PPR|PF01535.16|1.1e+03,PPR|PF01535.16|2.8,PPR|PF01535.16|3.9e+02,PPR|PF01535.16|0.25,PPR|PF01535.16|11,PPR|PF01535.16|3.5e-05,PPR|PF01535.16|5e+02,PPR_1|PF12854.3|48,PPR_1|PF12854.3|1.9,PPR_1|PF12854.3|3.4e+03,PPR_1|PF12854.3|35,PPR_1|PF12854.3|20,PPR_1|PF12854.3|11,PPR_1|PF12854.3|1.4e-08,PPR_1|PF12854.3|9.1e+02 R_Transcript_173527:325-2283(+)
ATGTTAGCTAGGTCTGTGATTGTGTTGAAAGTCAGAAATGTGCTTTCTAGTGTAAATGTAACCTTCCAAGCTCGTGGCTTTGCCCAGAACTCTGACCCTCATGCTAACCAGGTTGCTAAGTATTTCCTTCGGGCGAAGCTTGTTGACTCTGTACGTATTGTTCTTCGTTCTGGGTCTCCTAATTCACTCCTTCCTTTATTAAACAACCCGAATTTAGATTCCTTTGTAGTCACCAATGCTTTACGTTCCGCTCCTTCCCCTGATTCTGCTTTGTCCCTTGTTGAAGCCCTGAAAAGGGTTCCTAACTTTTCGCATACCCAGCATACTCTCCGTGCTATTGCGAAAATCCTTGCTAAGTCGAGGCGTACCACTCAGCTCAAGTTGCTTATTGATGGTGTAAATGCTGGAAAATTCACTAAGGTTTCACCCTTTAGCTTGTTCGACTGTATGCGGTTGTATGCTGAGGCTGGGGACCTTGATTCTGTGCTTTGTGTTTGGGAGGAGCTTCGAGCTCAAGGCACACGCCCCTGTATTGAGTCTTATAACTTGGTCTTGGAGGTTTTTGCACGATCAGGGAGGGACTTGGAGGCTGTTGAAGCATTTCGTGGTATGATGCAGGGAGGAGTTATTCCTAACTCAAGGACATTTACCATTGTTATCGAACACCTCTTCAATTCAGGAAAAGTTGAAGCTGGGAAGGAGATTTATGATATACTGCCACTAATGAGGATCAAGCATACTCTTAGGCAGTATTTGCTAATGGTAAGAGCATTTTCGAATCTTGGGCAGTTTGATGTTGTGAAGAGTGTTCTTGGAGAAATGAGAATGGAAGGGATTCTGCCTCCAATATCTATGCAATCGTCATTGCAGCGTATGCGGGATGCAGGGTTTTTGGAGGAGACTGATGAATTTCTTAGGGAGATGATACCTGATGATAGGATTAAGAAAATTGAGGATCACAGTGAAGACGAGGATGAGGAAGATGTTGATAATTATGGAGGTGATGCTATTGGTGCAGTTCAGTTGAAGCCATGGTTGGACCCCAGTGCTTTGGCAAGTGCTTTGCGGCATTGGAGACCTGACGATGTATCATCACTAGAAGATGCAAAACTAGTGTGGACAAGCCGTTTAGTTTGCAAGATAATTAGACACTTCAAATCTCCTCAAACAGCATGGCAGTTTTTCTGCTGGGTTGCCTGTCAACCTGGATTCACACATGATGTGCACACTTATTCAGGAGTGATCAGAAAACTAGCAAGCCGTGGAAAGGTTGATTTGGTTGATCATGTATTGTCAAAATTAAAGGATGAAGGAATTAAATTGGGATTCAGCACATTAAGACAAATTATTGATTTCTATGGGCTTTCCAGGGAAGGAGATGCTGCTTTGAGGGTCTTCCATGATGTCAAAGTGCTTTGTGCTCAATTGTCTGATACTAATATGTTGGTTTTATATTCTTCTCTTCTGCGATCATTAGCCAAGTGTGGAAGGGATTCTGATACTATGAATATGGTGAATCAGATGTTCTCCTCTGGGATACGTCCTGATGTTCAGACATTTTCTGGCTTGATGCATTATTTTGCAATTAAGGGTGATTTCAGAACAGTGCAGAAGCTCTTTGGGATGCTTCGGCAGAGTGGTGTAGAGCCGGATGTTTATATGTATAGGACTCTCATTCATGCTCACTGCAACACTGGAAAGGCTACTCTAGCATTGAGGTTATTTGAAGAAATGAGGAGCTCCAAGTTGCTGCCTGATGGTGCAACGAAGTCGTTGCTTGTCAAAAGTCTTTGGAAGGAAGGGAGACTTCGAGAAGCTTCCATTGTTGAACAGGCTTGTAAGGAGGTAGATGACATTTTCCCTGCTCCTTCTTCTGGTAATTTGTTTAATATCTGCTCTGTTGATCTAAATAGAGTATATTATACATACTGTGAAAGTTACCTAGCTTTTAAAGATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_173527.p1 GENE.R_Transcript_173527~~R_Transcript_173527.p1 ORF type:complete len:653 (+),score=142.02,PPR_2|PF13041.2|3.4e+02,PPR_2|PF13041.2|3e-06,PPR_2|PF13041.2|1.4e+02,PPR_2|PF13041.2|4.2,PPR_2|PF13041.2|2.8e+03,PPR_2|PF13041.2|1.3e-05,PPR_2|PF13041.2|9.3e-06,PPR_2|PF13041.2|8.5e-09,PPR_3|PF13812.2|1.3e+04,PPR_3|PF13812.2|2.2e+02,PPR_3|PF13812.2|7.4e+03,PPR_3|PF13812.2|5.7,PPR_3|PF13812.2|0.039,PPR_3|PF13812.2|14,PPR_3|PF13812.2|1.7,PPR_3|PF13812.2|0.038,PPR_3|PF13812.2|2.9e+03,PPR_3|PF13812.2|0.39,PPR_3|PF13812.2|0.34,PPR_3|PF13812.2|0.0053,PPR|PF01535.16|24,PPR|PF01535.16|0.061,PPR|PF01535.16|49,PPR|PF01535.16|0.091,PPR|PF01535.16|1.1e+03,PPR|PF01535.16|2.8,PPR|PF01535.16|3.9e+02,PPR|PF01535.16|0.25,PPR|PF01535.16|11,PPR|PF01535.16|3.5e-05,PPR|PF01535.16|5e+02,PPR_1|PF12854.3|48,PPR_1|PF12854.3|1.9,PPR_1|PF12854.3|3.4e+03,PPR_1|PF12854.3|35,PPR_1|PF12854.3|20,PPR_1|PF12854.3|11,PPR_1|PF12854.3|1.4e-08,PPR_1|PF12854.3|9.1e+02 R_Transcript_173527:325-2283(+)
MLARSVIVLKVRNVLSSVNVTFQARGFAQNSDPHANQVAKYFLRAKLVDSVRIVLRSGSPNSLLPLLNNPNLDSFVVTNALRSAPSPDSALSLVEALKRVPNFSHTQHTLRAIAKILAKSRRTTQLKLLIDGVNAGKFTKVSPFSLFDCMRLYAEAGDLDSVLCVWEELRAQGTRPCIESYNLVLEVFARSGRDLEAVEAFRGMMQGGVIPNSRTFTIVIEHLFNSGKVEAGKEIYDILPLMRIKHTLRQYLLMVRAFSNLGQFDVVKSVLGEMRMEGILPPISMQSSLQRMRDAGFLEETDEFLREMIPDDRIKKIEDHSEDEDEEDVDNYGGDAIGAVQLKPWLDPSALASALRHWRPDDVSSLEDAKLVWTSRLVCKIIRHFKSPQTAWQFFCWVACQPGFTHDVHTYSGVIRKLASRGKVDLVDHVLSKLKDEGIKLGFSTLRQIIDFYGLSREGDAALRVFHDVKVLCAQLSDTNMLVLYSSLLRSLAKCGRDSDTMNMVNQMFSSGIRPDVQTFSGLMHYFAIKGDFRTVQKLFGMLRQSGVEPDVYMYRTLIHAHCNTGKATLALRLFEEMRSSKLLPDGATKSLLVKSLWKEGRLREASIVEQACKEVDDIFPAPSSGNLFNICSVDLNRVYYTYCESYLAFKD*

Click here to download the sequence:
Link to NCBI Protein BLAST