Transcript Information: R_Transcript_173602.p1


Annotated TAIR IDAT1G31840.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:11424006-11426528 | Forward length=840
E-Value2.1E-97
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.434981207132
Replicate 20
Replicate 30.14406753205127
Condition 2: 8 Hour
Replicate 10.38499787652901
Replicate 20.28126895397718
Replicate 30.97036912121566
Condition 3: 24 Hour
Replicate 10.79413798586398
Replicate 20.90163008043241
Replicate 31.101268160347


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_173602.p1 GENE.R_Transcript_173602~~R_Transcript_173602.p1 ORF type:internal len:318 (+),score=50.95,PPR_2|PF13041.2|17,PPR_2|PF13041.2|3.8e-08,PPR_2|PF13041.2|1.6e-15,PPR_2|PF13041.2|0.0018,PPR_2|PF13041.2|3.4e-10,PPR_2|PF13041.2|1.9e-12,PPR_2|PF13041.2|4.2e-12,PPR_2|PF13041.2|2e-11,PPR_2|PF13041.2|1.8e-05,PPR_1|PF12854.3|0.81,PPR_1|PF12854.3|1.5e-10,PPR_1|PF12854.3|0.00015,PPR_1|PF12854.3|0.013,PPR_1|PF12854.3|1.5e-06,PPR_1|PF12854.3|1.2e-06,PPR_1|PF12854.3|7.2e-07,PPR_1|PF12854.3|1.7e-06,PPR|PF01535.16|9.6,PPR|PF01535.16|2.6,PPR|PF01535.16|2.6e-08,PPR|PF01535.16|0.0012,PPR|PF01535.16|0.0012,PPR|PF01535.16|0.00044,PPR|PF01535.16|3.9e-07,PPR|PF01535.16|0.0002,PPR|PF01535.16|0.00025,PPR_3|PF13812.2|2.1e+02,PPR_3|PF13812.2|0.13,PPR_3|PF13812.2|3.2e-05,PPR_3|PF13812.2|1.1e+02,PPR_3|PF13812.2|3.6,PPR_3|PF13812.2|6.4,PPR_3|PF13812.2|0.0044,PPR_3|PF13812.2|1.7,PPR_3|PF13812.2|0.69,MRP-S27|PF10037.5|4.2,MRP-S27|PF10037.5|8.4,MRP-S27|PF10037.5|0.006 R_Transcript_173602:1-951(+)
AAAAAGTTGAAGCAGCATTTCAATGTTTATGAGTTTGTTATGATGAGTTTTGTTGGTAATCAGCTGTTTGAGATGGCATTGTATTTTCACAGAAAGATGATTGATAGAGGTCTTGTTCCTGTTATTATTGATTGTAATAAGATACTCAAGGCTCTTTGTAAGAGAAGCTCTTTAGAAGTTGCATCTCAGCTCTTTTATACAATGATAGAAGTTGGCCCGAGTCCTAATTTGGTGACTTTTGGCACTTTGATTGACTCGTATTGCAAGGAAAAGAGTATAGATGAAGCTTTTAAGCTTTACAATTTGATGATGCAGAGGGGAATTGCTCCTGACTTGATTGTATATAGTATTCTTGTAGATGGCCTTTTGAAGAATGGAAAGTTGGAGGAAGGCTATATCCTCTTGTCCGAGGCTTTACAGAAGGGCATCAAGTTGGATGCTGTCATTTTTGGCTCAATTGTGGATTCATACGTGAGGGTCGGAGATTTGGGAAAGGTGATAGAGGTGTACAATAGAATGTGTAGGGTAGGTATCTCTCCTAGTGTAGTCAATTATGGCATTCTTATAAAGGGTTTGTGTCAACATGGTCGTGTTATTGCGGCTAGTGGAGTTTTTGGTGATCTTTTGAAGCACGGTTTGGACCCTTCTGTATCAACTTACAGTTGTCTTATTGATGGGTTCAGCAAATTGGGAAATTTGGAAGATGCATTTAGATGGTACAGAATGATGTTCCGGTGTGGTTATGTTCCTGATCTTGTCATCTATTCGATACTTGTTAATGGGTTTAGCAAGAAAGGGCATGTAAAGAAAGCACTTCAGATATTCTTCCAGGCCAAAATGATTGGTATACAACCTAACGTACATATTTTCAATACCTTGATAGATGGCTATTGTAGATTGAATCAAACGGGGGACATGATGAAGGTGTACAGTTTTATGCAAACGCATAAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_173602.p1 GENE.R_Transcript_173602~~R_Transcript_173602.p1 ORF type:internal len:318 (+),score=50.95,PPR_2|PF13041.2|17,PPR_2|PF13041.2|3.8e-08,PPR_2|PF13041.2|1.6e-15,PPR_2|PF13041.2|0.0018,PPR_2|PF13041.2|3.4e-10,PPR_2|PF13041.2|1.9e-12,PPR_2|PF13041.2|4.2e-12,PPR_2|PF13041.2|2e-11,PPR_2|PF13041.2|1.8e-05,PPR_1|PF12854.3|0.81,PPR_1|PF12854.3|1.5e-10,PPR_1|PF12854.3|0.00015,PPR_1|PF12854.3|0.013,PPR_1|PF12854.3|1.5e-06,PPR_1|PF12854.3|1.2e-06,PPR_1|PF12854.3|7.2e-07,PPR_1|PF12854.3|1.7e-06,PPR|PF01535.16|9.6,PPR|PF01535.16|2.6,PPR|PF01535.16|2.6e-08,PPR|PF01535.16|0.0012,PPR|PF01535.16|0.0012,PPR|PF01535.16|0.00044,PPR|PF01535.16|3.9e-07,PPR|PF01535.16|0.0002,PPR|PF01535.16|0.00025,PPR_3|PF13812.2|2.1e+02,PPR_3|PF13812.2|0.13,PPR_3|PF13812.2|3.2e-05,PPR_3|PF13812.2|1.1e+02,PPR_3|PF13812.2|3.6,PPR_3|PF13812.2|6.4,PPR_3|PF13812.2|0.0044,PPR_3|PF13812.2|1.7,PPR_3|PF13812.2|0.69,MRP-S27|PF10037.5|4.2,MRP-S27|PF10037.5|8.4,MRP-S27|PF10037.5|0.006 R_Transcript_173602:1-951(+)
KKLKQHFNVYEFVMMSFVGNQLFEMALYFHRKMIDRGLVPVIIDCNKILKALCKRSSLEVASQLFYTMIEVGPSPNLVTFGTLIDSYCKEKSIDEAFKLYNLMMQRGIAPDLIVYSILVDGLLKNGKLEEGYILLSEALQKGIKLDAVIFGSIVDSYVRVGDLGKVIEVYNRMCRVGISPSVVNYGILIKGLCQHGRVIAASGVFGDLLKHGLDPSVSTYSCLIDGFSKLGNLEDAFRWYRMMFRCGYVPDLVIYSILVNGFSKKGHVKKALQIFFQAKMIGIQPNVHIFNTLIDGYCRLNQTGDMMKVYSFMQTHN

Click here to download the sequence:
Link to NCBI Protein BLAST