Transcript Information: R_Transcript_173826.p1


Annotated TAIR IDAT2G07050.1
Annotated Gene Namecycloartenol synthase 1
Annotated Gene Symbol(s)CAS1
Annotation TypeOrtholog
Chromosome Positionchr2:2924629-2930295 | Forward length=759
E-Value7.6E-153
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 149.761048317031
Replicate 248.491455723355
Replicate 343.540981383163
Condition 2: 8 Hour
Replicate 142.947429788422
Replicate 248.980979271168
Replicate 346.603539965835
Condition 3: 24 Hour
Replicate 159.58097590047
Replicate 254.525501146149
Replicate 348.72619971964


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_173826.p1 GENE.R_Transcript_173826~~R_Transcript_173826.p1 ORF type:5prime_partial len:252 (-),score=29.76,SQHop_cyclase_C|PF13243.2|7.5e-45,Prenyltrans|PF00432.17|7.6,Prenyltrans|PF00432.17|1.9e-11,Prenyltrans|PF00432.17|7.4e-10,Prenyltrans|PF00432.17|1.7e+03 R_Transcript_173826:198-953(-)
CTGGAAGTTAACCGTTTGTATGATGCCGTAAATGTAATCCTATCCCTACAGAATGTTGATGGAGGATTTGCAACGTATGAGCTCACACGATCCTACCTTTGGCTAGAGATTATTAACCCAGCTGAAACATTTGGCGATATTGTCATTGATTATCCCTATGTCGAGTGTACCTCAGCCTCAATCCAAGCCCTAGAATCATTTAGAAGATTATATCCTGGTCATAGGAGAGACGAGATAGAGGATTGTATCAATCGAGCTGTGAGGTTCATCGAAAAGATACAAGCAGCAGATGGTTCATGGTATGGTTCCTGGGGAGTCTGCTTCACATATGGTACATGGTTTGGAGTCAAGGGTTTGGTTGCTGCTGGAAAGACCTATGATAACTGTCCGAGCATCCGGAAAGCCTGTGCATTTCTGTTGTCGAAACAGCTTGATTGTGGTGGCTGGGGAGAGAGTTACCTTTCATGTCAAAACAAGGTGTACACACATATTGAAGGGAACAAAGGTCATGTAGTCAACACAGGATGGGCCATGCTGGGTCTTATTGGAGCTGGACAGGCTGATAGAGATCCATTGCCATTGCACCGTGGTGCTAGATTTCTAATCAATTCCCAAATGCAAAATGGAGATTTTCCGCAACAGGAGATAATGGGGGTATTCAACAGGAACTGCATGATCACATATGCAGCGTACCGAAACATCTTCCCCACTTGGGCTCTTGGTGAATACCGTACTCTAGTACTCAAGAGCAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_173826.p1 GENE.R_Transcript_173826~~R_Transcript_173826.p1 ORF type:5prime_partial len:252 (-),score=29.76,SQHop_cyclase_C|PF13243.2|7.5e-45,Prenyltrans|PF00432.17|7.6,Prenyltrans|PF00432.17|1.9e-11,Prenyltrans|PF00432.17|7.4e-10,Prenyltrans|PF00432.17|1.7e+03 R_Transcript_173826:198-953(-)
LEVNRLYDAVNVILSLQNVDGGFATYELTRSYLWLEIINPAETFGDIVIDYPYVECTSASIQALESFRRLYPGHRRDEIEDCINRAVRFIEKIQAADGSWYGSWGVCFTYGTWFGVKGLVAAGKTYDNCPSIRKACAFLLSKQLDCGGWGESYLSCQNKVYTHIEGNKGHVVNTGWAMLGLIGAGQADRDPLPLHRGARFLINSQMQNGDFPQQEIMGVFNRNCMITYAAYRNIFPTWALGEYRTLVLKSK*

Click here to download the sequence:
Link to NCBI Protein BLAST