Transcript Information: R_Transcript_17399.p1


Annotated TAIR IDAT1G77110.1
Annotated Gene NameAuxin efflux carrier family protein
Annotated Gene Symbol(s)PIN6
Annotation TypeOrtholog
Chromosome Positionchr1:28970855-28974408 | Forward length=570
E-Value2.7E-79
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 138.045328255016
Replicate 244.825836551422
Replicate 341.618506379516
Condition 2: 8 Hour
Replicate 146.965659031343
Replicate 245.422225041252
Replicate 341.333185629556
Condition 3: 24 Hour
Replicate 160.85201915777
Replicate 270.364247641263
Replicate 344.513789772871


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_17399.p1 GENE.R_Transcript_17399~~R_Transcript_17399.p1 ORF type:complete len:415 (+),score=88.09,Mem_trans|PF03547.14|4.8e-79 R_Transcript_17399:363-1607(+)
ATGGTGGATCAAGAAGATGAGGATCTGCAAATGGCGTTAAGGATGAGTATGCAACCATCTCCACCTGAGCCCAAACGGAGTAAACCTCGAGAAACCCTAGCTGCCAGTGCCGAAGCTCCGCCGGAAGAGTCGCCGGAGGCCAAGAGCCGGCGGCTCCAACGGGAGCTAATGGCGGCCGCTGCCGAGAAACGGATGATGGTAACGAAAAGTCAACAGCAACAACAACAGCAGCAACAGCAGGGAGGAGGGGGGAAGGGGAGTTATGGAAGGAGTATGAGTGGGGAGCTCCACCTCAATGGTGGTGGGGGTTCCCTCCCTCCGTATCCACCCCCGAACCCTATGTTTACTGGAGGTTCAGGTGGCGGACCTAGGAAGAAGGAGGGTGGGAACCCGCCCACCCCTCCTAATAAGGAGCTACACATGTTTGTGTGGAGCTCCAACACGTCTCCTGTATCGGAGCATATGAAGAGTAACGCTATGAACAATAGGGGGCCTTTGCCCCCTCCCGATTTTGGGGTTGTTGATTCTTCTAAGGCCGTGCTTCAGCAAGAGATTGCTGCTGCTCGAGCTGGAATGAATGATTTCCCTGAGAGTGCAAGTCCAGGAAGGAAAGTAGCAAATGGAGGGAAGGATGTAGAAGGAGAGGAACCCAAATTTCCAGCAAATGGATCGCCTTACTTGTCCCAGAAAAAGGTGGACGATTTGGAAGATCATGAGAATGTTGAGAGGAAACACCGGATGCCCCCAGCCAGTGTTATGACTAGACTCATTCTCATCATGGTTTGGAGGAAACTCATTCGTAATCCCAACACTTATTCTAGCCTTCTTGGCTTGGCTTGGTCTCTCATTTCTTACAGGTGGAATGTAAAAATGCCGACAATTATGCACGGATCAATATCGATTTTGTCTGACGCTGGTTTGGGCATGGCTATGTTCAGTCTAGGGTTGTTCATGGCCTTGCAACCAAAGATCATAGCATGTGGGAAATCGGTGGCAACATTCGCAATGGCAGTAAGGTTCTTGACTGGTCCAGCTGTTATTGCTGCTACTTCCATCGCTATTGGCCTTCGAGGTGTTCTTTTACATGTCGCTATTGTTCAGGCTGCTCTTCCTCAAGGAATTGTGCCATTTGTTTTCGCCAAGGAGTACAACGTGCATCCTGATATCCTTAGCACTGCGGTGATATTTGGAATGTTGATAGCATTACCAATTACGATTCTCTATTATGTGCTTCTTGGGGTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_17399.p1 GENE.R_Transcript_17399~~R_Transcript_17399.p1 ORF type:complete len:415 (+),score=88.09,Mem_trans|PF03547.14|4.8e-79 R_Transcript_17399:363-1607(+)
MVDQEDEDLQMALRMSMQPSPPEPKRSKPRETLAASAEAPPEESPEAKSRRLQRELMAAAAEKRMMVTKSQQQQQQQQQQGGGGKGSYGRSMSGELHLNGGGGSLPPYPPPNPMFTGGSGGGPRKKEGGNPPTPPNKELHMFVWSSNTSPVSEHMKSNAMNNRGPLPPPDFGVVDSSKAVLQQEIAAARAGMNDFPESASPGRKVANGGKDVEGEEPKFPANGSPYLSQKKVDDLEDHENVERKHRMPPASVMTRLILIMVWRKLIRNPNTYSSLLGLAWSLISYRWNVKMPTIMHGSISILSDAGLGMAMFSLGLFMALQPKIIACGKSVATFAMAVRFLTGPAVIAATSIAIGLRGVLLHVAIVQAALPQGIVPFVFAKEYNVHPDILSTAVIFGMLIALPITILYYVLLGV*

Click here to download the sequence:
Link to NCBI Protein BLAST