Transcript Information: R_Transcript_174009.p2


Annotated TAIR IDAT4G23370.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239, plant (InterPro:IPR004314); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G23360.1); Has 2365 Blast hits to 710 proteins in 27 species: Archae - 0; Bacteria - 35; Metazoa - 0; Fungi - 30; Plants - 2300; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:12206362-12213435 | Reverse length=1038
E-Value1.9E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.28633421995191
Condition 2: 8 Hour
Replicate 10
Replicate 20.55902204602964
Replicate 30.22689513275484
Condition 3: 24 Hour
Replicate 10.2869725903463
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_174009.p2 GENE.R_Transcript_174009~~R_Transcript_174009.p2 ORF type:5prime_partial len:80 (+),score=8.40,DUF239|PF03080.11|1.7e-18 R_Transcript_174009:3-242(+)
AGTGTGTATGGGGATAGAGAGACTCGGTTATATACATATTGGACGGTTGATGGTTCGAAAACAACAGGTTGCTTTGATCTCATTTGCCCTGGTTTTGTACAAATAAGCAACGAGATTGCTCTTGGTGGTGTCATCCGATCAATCCCAACTCCTGGTGGCCTCCCTTGGATCATGACAGTGTACATTGTTAGGGTCAGGAAATCAATGCAAAGCCTCCTATTGATTTTATGTTGTGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_174009.p2 GENE.R_Transcript_174009~~R_Transcript_174009.p2 ORF type:5prime_partial len:80 (+),score=8.40,DUF239|PF03080.11|1.7e-18 R_Transcript_174009:3-242(+)
SVYGDRETRLYTYWTVDGSKTTGCFDLICPGFVQISNEIALGGVIRSIPTPGGLPWIMTVYIVRVRKSMQSLLLILCCV*

Click here to download the sequence:
Link to NCBI Protein BLAST