Transcript Information: R_Transcript_174055.p1


Annotated TAIR IDAT5G04200.1
Annotated Gene Namemetacaspase 9
Annotated Gene Symbol(s)AtMC9, MC9
Annotation TypeOrtholog
Chromosome Positionchr5:1153893-1154870 | Forward length=325
E-Value2.6E-123
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.304703914554
Replicate 29.7686714927792
Replicate 38.927399244422
Condition 2: 8 Hour
Replicate 16.0659846697103
Replicate 25.4044427410721
Replicate 35.26451546694
Condition 3: 24 Hour
Replicate 14.2308949875829
Replicate 21.7990694563311
Replicate 32.1160318730535


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_174055.p1 GENE.R_Transcript_174055~~R_Transcript_174055.p1 ORF type:complete len:331 (+),score=57.63,Peptidase_C14|PF00656.18|1.9e-57 R_Transcript_174055:253-1245(+)
ATGGAAAATGGAAACAAGAGAATGGCTGTTTTAGTAGGGTGCAATTACCCTAACACACGATATGAACTGCATGGATGTATCAACGACGTGGTTGCGATGAGAGAGTTGCTTGTGCATCGATTTGGGTTCGATATGAGCTCGATCGATGTTCTTACGGATGAGCATGGTGATGGTTCAAGTTCTAAGGTGTTACCTACAGGAACTAACATTAAGGAGGCACTTAATAGGATGGTTGAAAAGGCTGAAGCAGGGGATGTCCTGTTTTTTCATTATAGTGGGCATGGAACTAGGATTCCTTCTAAGTATCATCTCAAAAAAGAGGAAGCAATTGTTCCTTGTGATTTCAACCTCATCACTGATGTGGACTTCCGGCAGCTAGTGAACAAGTTACCCAAGGGAGTAAGCTTCACAATGCTCTCAGATTCATGCCACAGTGGAGGCCTCATTGACAAAGAAAAAGAGCAAATTGGGCCCCATTCTTCACCACGTTCAGCCCAAGATAACACCAAACTGGACCACCAAAACCCCAAGCCCAAGAACATCCCATATGAGTCCATATTGGAGCACTTAGCCTCCCTCACAAACATGGTTGAGAATCAAATTGGGACCCATTTAAGAGCCCTATTTGGAAACGATGCTAGCCCAAAATTCTGGCTTCCCGAAATCGACTTGGACAAGATATTTGGGCTGGCCCAAAGGTCAGACTCTGGTATTTTACTTAGTGGGTGCCAGTCTAATGAGACCTCTGCCGACATGTCCGCAAACGGGCTTGGTGGTAAGGCCCATGGAGCCTTCTCCTTTGCAGTCCAGTCCACATTACAGGACCGGCCCAGCCCAATTACGAACAAGGAGGTGGTGACCTTGGCTAGAGAGATATTGAACAAGGAAGGACTTGAAGACCAACATCCTTGCTTATATTGCAGTGATGAGAATGTTGATGCACCCTTCTTGTTGTGGAATGGTGAAAAACAAGTAATCTCATCATCAACATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_174055.p1 GENE.R_Transcript_174055~~R_Transcript_174055.p1 ORF type:complete len:331 (+),score=57.63,Peptidase_C14|PF00656.18|1.9e-57 R_Transcript_174055:253-1245(+)
MENGNKRMAVLVGCNYPNTRYELHGCINDVVAMRELLVHRFGFDMSSIDVLTDEHGDGSSSKVLPTGTNIKEALNRMVEKAEAGDVLFFHYSGHGTRIPSKYHLKKEEAIVPCDFNLITDVDFRQLVNKLPKGVSFTMLSDSCHSGGLIDKEKEQIGPHSSPRSAQDNTKLDHQNPKPKNIPYESILEHLASLTNMVENQIGTHLRALFGNDASPKFWLPEIDLDKIFGLAQRSDSGILLSGCQSNETSADMSANGLGGKAHGAFSFAVQSTLQDRPSPITNKEVVTLAREILNKEGLEDQHPCLYCSDENVDAPFLLWNGEKQVISSST*

Click here to download the sequence:
Link to NCBI Protein BLAST