Transcript Information: R_Transcript_174335.p2


Annotated TAIR IDAT3G57080.1
Annotated Gene NameEukaryotic rpb5 RNA polymerase subunit family protein
Annotated Gene Symbol(s)RPB5B, NRPE5
Annotation TypeHomolog
Chromosome Positionchr3:21125878-21127470 | Forward length=222
E-Value2E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.352071181831
Replicate 22.1385120794378
Replicate 32.5451930662392
Condition 2: 8 Hour
Replicate 14.3076984629413
Replicate 23.5197684379644
Replicate 33.0252684367312
Condition 3: 24 Hour
Replicate 14.2514457829082
Replicate 23.8800918418608
Replicate 34.4586065102939


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_174335.p2 GENE.R_Transcript_174335~~R_Transcript_174335.p2 ORF type:5prime_partial len:108 (-),score=11.49,RNA_pol_Rpb5_N|PF03871.10|4.8e-16 R_Transcript_174335:72-395(-)
GGAGAACTAGGAAGATGCCTAAGCAGCTTTGTCGACGACGGCACTGTCGAAAGCCACCGTTACTTTCTGGCTCGAAGAACAGTCCTTGAGATGCTCAAGGACAGAGGTTTTGCCGTCCCTAATTCCGAAATTGAACTTTCTCTTCAAGAGTTTCGTGACATTTACGGGCCTAAACCCGACCCGGATCGCCTTCGGGTCTCTACTGCCCTCCGTTCTGACCCTTCCAAAAAGGTCCTCTCTTTTCTTTCTGGGCTTCGTCTTCAATTTATAGTTCTCTTTTTTTGGGGGGTTTTGAAAGAAAGGGTTAATGGGTTTGGATTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_174335.p2 GENE.R_Transcript_174335~~R_Transcript_174335.p2 ORF type:5prime_partial len:108 (-),score=11.49,RNA_pol_Rpb5_N|PF03871.10|4.8e-16 R_Transcript_174335:72-395(-)
GELGRCLSSFVDDGTVESHRYFLARRTVLEMLKDRGFAVPNSEIELSLQEFRDIYGPKPDPDRLRVSTALRSDPSKKVLSFLSGLRLQFIVLFFWGVLKERVNGFGF*

Click here to download the sequence:
Link to NCBI Protein BLAST