Transcript Information: R_Transcript_174392.p1


Annotated TAIR IDAT3G42723.1
Annotated Gene Nameaminoacyl-tRNA ligases;ATP binding;nucleotide binding
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:14838392-14841189 | Reverse length=818
E-Value3E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.064957156422487
Replicate 20
Replicate 30.16303727826443
Condition 2: 8 Hour
Replicate 10
Replicate 20.39788045980757
Replicate 30
Condition 3: 24 Hour
Replicate 10.16340076318651
Replicate 20.078488465802766
Replicate 30.46735312498713


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_174392.p1 GENE.R_Transcript_174392~~R_Transcript_174392.p1 ORF type:5prime_partial len:281 (+),score=49.46,Retrotrans_gag|PF03732.13|6.9e-16 R_Transcript_174392:3-845(+)
GGGGTGTCTCAGGGAGGACCCAATGGAGGTAACAATATTAACCACTTATTCTCTAGGCTCACCAAGGTAGATTTTCCAAGATTTTCTGGTAAAAACTTAAAAGAATGGATATATAAATGTGATCAGTTTTTTGTTATTGATGAAACTAAGGAAGAAATGAAAGTAAAAATTGCTTCATTACGTCTGGAAGGGAAGGCATTACAGTGGCACCACGCTTACATGAAAAGTAGGCTAACCTTAGTTCCCCCTTCATGGTCTGAATATGTTCATGTACTGAATGATAGATTTGGAGAGTTGTTTGATGACCCTATGATGGAGTTAAAAAACCTAAAACAAAAGGGAAGTGTCAGTGACTACCATGAGAAGTTTGATAGTCTGATGAATAGGGTGAGCTTGCCTGAAGAGTATTTGGTTAGTTGCTTTATTGCTGGACTTGACCTTAATCTGCAACCTCTTGTGAGAGCCCTTAACCCCAGAACTGTGAATCAGGCTTCCAAAGTTGCTAGAATATATGAACCCACTTTGAAAACACCTGCTGCTAACTACAGAATCCAAAAACCCTTATCCTTTCCATCTCCTAACCCCACCACAAAAAACCCCCCAAACACTACACCCCAACCAAAACATCTTCAAACACCCCCATTGTTACCCAACCCACCAAATAGACCTCATTATAGACAGCTTTCCTCTGCTGAAATTGAGGACAAAAAGGCTAAAGGCCTATGTTTCATTTGTAATGAGCCAGTCACCCCTGGACACCACCTTAAACACAGAAGAGCCCAGCTGTATGTCCTGGAGGATATTGAGGAGGAGGAGGAAGTTCTTGAGGGAAATAATACATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_174392.p1 GENE.R_Transcript_174392~~R_Transcript_174392.p1 ORF type:5prime_partial len:281 (+),score=49.46,Retrotrans_gag|PF03732.13|6.9e-16 R_Transcript_174392:3-845(+)
GVSQGGPNGGNNINHLFSRLTKVDFPRFSGKNLKEWIYKCDQFFVIDETKEEMKVKIASLRLEGKALQWHHAYMKSRLTLVPPSWSEYVHVLNDRFGELFDDPMMELKNLKQKGSVSDYHEKFDSLMNRVSLPEEYLVSCFIAGLDLNLQPLVRALNPRTVNQASKVARIYEPTLKTPAANYRIQKPLSFPSPNPTTKNPPNTTPQPKHLQTPPLLPNPPNRPHYRQLSSAEIEDKKAKGLCFICNEPVTPGHHLKHRRAQLYVLEDIEEEEEVLEGNNT*

Click here to download the sequence:
Link to NCBI Protein BLAST