Transcript Information: R_Transcript_174395.p1


Annotated TAIR IDAT4G15096.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40955.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:8620596-8622635 | Forward length=679
E-Value0.0002
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.072432384740947
Replicate 20.16663730489125
Replicate 30.27269925709705
Condition 2: 8 Hour
Replicate 10
Replicate 20.088733658099943
Replicate 30.21609060262365
Condition 3: 24 Hour
Replicate 10.45551204816873
Replicate 20.1750417372268
Replicate 30.086855970979751


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_174395.p1 GENE.R_Transcript_174395~~R_Transcript_174395.p1 ORF type:3prime_partial len:252 (+),score=46.47,RVP_2|PF08284.7|6.8e-09,Asp_protease_2|PF13650.2|3.4e-08,gag-asp_proteas|PF13975.2|8.7e-07 R_Transcript_174395:154-906(+)
ATGAACCTACCCTCAAGACCCCTACTACTAACTAGAAAACCAACAGACCCATATTACTACCAACCCACACCACCACAAGAAAACCCCCCAAACACTACCTGCAGCACCAAAAATCAATCTACCCCACCTTTACTACCTAACCCACACAATAGACCTTCCTATAGACAACTTTCCCCTGCTGAGATTGAGGAGAAGAAAGCTAAGGGGCTATGTTTTATCTGCAATGAACCCTTTACACCAGGTCACCACCTCAAACACAGAAGAGCCCAGTTGTATGTTCTGGATGAGATTGAGGAGGAGGAGGAGGAGATTGTTGAAGGAAATGATACCCAGGAAGTAGGGGAGAGTAGTAAGGAGGCTGATAAGGATCTGGGCAAGGCACCCTTGATATCTTTAAATGCCCTCACTGGAAGTGATGCTTGCCAAACACTGAGAGTGACAGCCTATCACAACAAGAAATCTCTGCATATATTGATTGATACTGGGAGCACACACAACTTTTTGGATGAGGGGATGGCCAAAAGGTTGGGCTGTAAGTTGAACCCCATGGACAAACCTCTGACCATATCAATAGCTGATGGGATCAGGTTGATTGCATCTCAAGTGTGCAAGGGGTTCTCATGGCAGCTTCACAACACAACATTCTCTGTAGATCTGATTGTCATTCCTCTAGGGGGATGTGATATGGTTTTGGGGGTACAATGGCTCAAAACTCTTGGCAAAGTCACCTTTGACTTTGATAAACTCACTATG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_174395.p1 GENE.R_Transcript_174395~~R_Transcript_174395.p1 ORF type:3prime_partial len:252 (+),score=46.47,RVP_2|PF08284.7|6.8e-09,Asp_protease_2|PF13650.2|3.4e-08,gag-asp_proteas|PF13975.2|8.7e-07 R_Transcript_174395:154-906(+)
MNLPSRPLLLTRKPTDPYYYQPTPPQENPPNTTCSTKNQSTPPLLPNPHNRPSYRQLSPAEIEEKKAKGLCFICNEPFTPGHHLKHRRAQLYVLDEIEEEEEEIVEGNDTQEVGESSKEADKDLGKAPLISLNALTGSDACQTLRVTAYHNKKSLHILIDTGSTHNFLDEGMAKRLGCKLNPMDKPLTISIADGIRLIASQVCKGFSWQLHNTTFSVDLIVIPLGGCDMVLGVQWLKTLGKVTFDFDKLTM

Click here to download the sequence:
Link to NCBI Protein BLAST