Transcript Information: R_Transcript_174618.p2


Annotated TAIR IDAT3G31430.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G18636.1); Has 295 Blast hits to 291 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 295; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:12795861-12796871 | Reverse length=336
E-Value2E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.60843203182396
Replicate 20.46658445369551
Replicate 30.33935907549855
Condition 2: 8 Hour
Replicate 10.2720651660805
Replicate 20.24845424267984
Replicate 30.26891274993166
Condition 3: 24 Hour
Replicate 10.85028915658163
Replicate 20.3267445761567
Replicate 30.2431967187433


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_174618.p2 GENE.R_Transcript_174618~~R_Transcript_174618.p2 ORF type:complete len:270 (+),score=37.11,DUF4283|PF14111.2|8.7e-26,zf-CCHC_4|PF14392.2|9.8e+02,zf-CCHC_4|PF14392.2|1e-12 R_Transcript_174618:256-1065(+)
ATGGCAGGTTTACAACTTTGTAATTCTCTGGGGGATACTGAATCCTTGGTGGGGGACATCAAAAAACTTTATATTGCCCCCAAAGAAGATAATGAACTCCCTTCAAACATAAATATCACTGACAAGATTGGTCTGTGCTTAGTTGGGAAAGTTATTTCCAAGAAACCCATTCGCAAGAAGGTGGCTATGACGGTTATTGAAAAGAGCTGGAATCTTGAAGGTGCTTTGGAAATCTCCTTTCTGGGGGAACACGAGCTATTGTTTATCTTTAAAAAAGCGGAGGACAGACAGAAGTTTCTGAATAGGGGTTTTTGGAATGTTATGGGGAAGATGATGATTCTGAAGGAGTGGGAAATGGAGGATAATCTGGAGGAAGTGGATTTTACTAAGGCCACCATTTGGCTTCAAATCCATGGACTTCATTGGTCCAAGTTATCGGCGACGAATGCGGTTCAGATTGGAAAATATTTTGGTCAAGTTCTAGGGGTTGATGTAGTTTCTGAACAGCGTCTCCTCGTAAGGAAGTATCTTAGGGTGAAGGTAAGTCTGGACATATCCAAACCGTTACCTAGAGGTATGTTTATGAAATCTGCTGGTTCTTGGAAATGGATTTCTGTTAAGTTTGAACGTTTAGCCGACTATTGCTATAAATGTGGCGTATTGGGGCATGAATGTGAGGATTGTACACTAGGGTTTAAACCGGTTTTTAACCCTCCTGAAATTGGTTTCGGCCTTGAACTGAGGGCAACTGATTTCTTAGATGTTAATGCCCCTTTAAAACATTTCAAGATATTTTGTCTGAAGAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_174618.p2 GENE.R_Transcript_174618~~R_Transcript_174618.p2 ORF type:complete len:270 (+),score=37.11,DUF4283|PF14111.2|8.7e-26,zf-CCHC_4|PF14392.2|9.8e+02,zf-CCHC_4|PF14392.2|1e-12 R_Transcript_174618:256-1065(+)
MAGLQLCNSLGDTESLVGDIKKLYIAPKEDNELPSNINITDKIGLCLVGKVISKKPIRKKVAMTVIEKSWNLEGALEISFLGEHELLFIFKKAEDRQKFLNRGFWNVMGKMMILKEWEMEDNLEEVDFTKATIWLQIHGLHWSKLSATNAVQIGKYFGQVLGVDVVSEQRLLVRKYLRVKVSLDISKPLPRGMFMKSAGSWKWISVKFERLADYCYKCGVLGHECEDCTLGFKPVFNPPEIGFGLELRATDFLDVNAPLKHFKIFCLKK*

Click here to download the sequence:
Link to NCBI Protein BLAST