Transcript Information: R_Transcript_174619.p2


Annotated TAIR IDAT4G20520.1
Annotated Gene NameRNA binding;RNA-directed DNA polymerases
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:11045912-11047716 | Forward length=376
E-Value4E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.89682178101219
Replicate 20.66751244098057
Replicate 30.59583999527564
Condition 2: 8 Hour
Replicate 10.42461037480772
Replicate 20.77552191356713
Replicate 30.47215172133955
Condition 3: 24 Hour
Replicate 10.79622452812847
Replicate 20.7011787508565
Replicate 30.75911114521031


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_174619.p2 GENE.R_Transcript_174619~~R_Transcript_174619.p2 ORF type:complete len:346 (+),score=39.44,RVT_1|PF00078.23|1.7e-47 R_Transcript_174619:3376-4413(+)
ATGGTGCAGGCTTTCTTCCATTCAGGGTTTCTCTTGAGGGAATTAAATCATACCTTCATAACTTTGATCCCTAAATCCGGTAAAGCAATGAAGGTAACTGATTTCAGACCCATCTCCTTATGCAATGTAGCTTATAAAATAATCTCCAAGATTATAGCCAATAGACTAAAATCCTTCTTAAATGAGATTATTAGCCCTTTTCAATCTGCTTTCATACCTGGCAGATATATCACTGATAACACGATTATGATTAATGAGGTAATTCATTGTATGTCAAAAAACAACTCCAAGAAGGGTCTTATGGCTGTGAAAGTTGATATGGCAAAAGCTTACGACAAAGTAGAATGGGTGTTTATTACTAATGTACTTAAGGTTTTGGGATGTTCTGATAAGTTTGTGCAACTTGTTAGCCAGTGCATTTCCACAACCTCATATTTTATCTTGGTGAATGGTAGGCCCCAAGGGTTATATAGACCTGGCAGAGGGCTTAGACAGGGAGACTCTCTGTCCCCTTTCCTTTTTGTCATCACTATGGATGCTCTGTCCACACTGATACAGAGAAAACAACAACAAGGGAAGATAAAAGGGATCAACATTGCTAGAGATTGTCCACCTATCTCGCATTTGATGTATGCAGATGATCTAGTGTTGTTCAGTAGGACTGATGCTCAAAATGCTAGGCAACTTTTGGAGGTGATGGAGACTATTGAGGAATGGAGTGGTCTCAGTGCAAATAAAATGAAGTCAAGCATTTTCTTTAGTAAAAAAACAAAAAGAGAAAATATGGTGGAAGTCAAGAGACTCCTACAGTTTAGAGAGATGGATAAGGATGCTATTTACCTGGGTTTGCCTTTTTTCAGGAAAGAGAGCAGAACCAAGAGATTCAAATTTATCAAGGATAGGATGCAATCCAAATTACAGGGGTGGAAGGCTAGAAACATGTCATATGTAGCTAGAGCTACCCTTATCAAATCAGTAGCTTCAGCTATCCCGGTATACTCCATGTCCAGCAACCTGATGACAAAAAAAAATGTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_174619.p2 GENE.R_Transcript_174619~~R_Transcript_174619.p2 ORF type:complete len:346 (+),score=39.44,RVT_1|PF00078.23|1.7e-47 R_Transcript_174619:3376-4413(+)
MVQAFFHSGFLLRELNHTFITLIPKSGKAMKVTDFRPISLCNVAYKIISKIIANRLKSFLNEIISPFQSAFIPGRYITDNTIMINEVIHCMSKNNSKKGLMAVKVDMAKAYDKVEWVFITNVLKVLGCSDKFVQLVSQCISTTSYFILVNGRPQGLYRPGRGLRQGDSLSPFLFVITMDALSTLIQRKQQQGKIKGINIARDCPPISHLMYADDLVLFSRTDAQNARQLLEVMETIEEWSGLSANKMKSSIFFSKKTKRENMVEVKRLLQFREMDKDAIYLGLPFFRKESRTKRFKFIKDRMQSKLQGWKARNMSYVARATLIKSVASAIPVYSMSSNLMTKKNV*

Click here to download the sequence:
Link to NCBI Protein BLAST