Transcript Information: R_Transcript_174847.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value9E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.13997533610865
Replicate 30.6108463358974
Condition 2: 8 Hour
Replicate 10.1632390996483
Replicate 20.1490725456079
Replicate 30.36303221240774
Condition 3: 24 Hour
Replicate 10.45915614455408
Replicate 20.29407011854103
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_174847.p1 GENE.R_Transcript_174847~~R_Transcript_174847.p1 ORF type:5prime_partial len:150 (-),score=7.06,zf-RVT|PF13966.2|6.2e-08,zf-RVT|PF13966.2|2.3e+03 R_Transcript_174847:13-462(-)
TTAGGGAAGATTAACACCAATGATATACGACAGCGACGGAGGCCCTATTTGTGTCTTTCTCCGGATGTATGCTTTATGTGCGGGGAGAGTGGGGAGACTGCTACTCATCTGTTCCTCCATTGCCCGGTTGTTCGATTCTTGTGGGCTTCGTTGTTTGGGGTGCGTGGGGAAACCCTGGTATGCCCTTCCACCATAGTGGAGTTCCTTCAGGTCCACTTCTCGGGGTTTGGCCGGAATAAGGAGTTGGGTATGTTATGGCGTAACGCGGTTTTTGCTATCCTGTGGTGTGTTTGGTTGGAAAGGAATGCTAGAGTGTTCAAGCAGGTTGCTCTTCCTCCTCCCCTCCTTTGGGAGCGCATCACCTTTTTGGCCTCCCTGTGGAGTAAGGCAGGCGGGGCTTTCCGTAGTTATTCTATTACTGTAATTCAACGCAATTGGGCGATATTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_174847.p1 GENE.R_Transcript_174847~~R_Transcript_174847.p1 ORF type:5prime_partial len:150 (-),score=7.06,zf-RVT|PF13966.2|6.2e-08,zf-RVT|PF13966.2|2.3e+03 R_Transcript_174847:13-462(-)
LGKINTNDIRQRRRPYLCLSPDVCFMCGESGETATHLFLHCPVVRFLWASLFGVRGETLVCPSTIVEFLQVHFSGFGRNKELGMLWRNAVFAILWCVWLERNARVFKQVALPPPLLWERITFLASLWSKAGGAFRSYSITVIQRNWAIL*

Click here to download the sequence:
Link to NCBI Protein BLAST