Transcript Information: R_Transcript_174933.p1


Annotated TAIR IDAT1G23720.1
Annotated Gene NameProline-rich extensin-like family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:8388655-8391342 | Forward length=895
E-Value4E-21
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.5729200166684
Replicate 21.6529002455384
Replicate 32.3394114991815
Condition 2: 8 Hour
Replicate 12.240196154748
Replicate 23.663378514407
Replicate 33.5144607796919
Condition 3: 24 Hour
Replicate 12.7353983079818
Replicate 23.2848257922136
Replicate 33.4461492485753


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_174933.p1 GENE.R_Transcript_174933~~R_Transcript_174933.p1 ORF type:5prime_partial len:470 (+),score=86.83,HMA|PF00403.22|6.5e-12 R_Transcript_174933:3-1412(+)
TTGAGGCTCCTTCATCTTCCTCCTCCCTTCAAGATGGGTACACCACTAGAGAGACCTTGGATTACAGAGATCAATGTCCGCATGGACTGCAACGGATGTGTGCAGAAGATTAAAAAGGCGCTCAATGGGATTAATGGTATATATGATCTCTACATCGACTTTCAGCAGCAAAAGTTGATAATAACTGGATGGGCAGATCCTGAAAGAATTATCAAAGCCATAAAGAAAGTCAGGAAAGTTGCAACCATATACTCCCACACAGAAGCACCGGATCCAAATTCGCAGCCCACAGAAACCCCGCCAGTTGGCGAAGCGCCACCTCCAGAACCTCCACAAGAACACCAGGAGCAAAATGCACAATACCAGCCACCAGCAGAACATCCTACATCAGAAGAAGCACCTCCTCCAGAGCCTCCACGAGAAGGGCAACCTAATGATCAACCACCTCCTGAACAACCTCCTCAAAATCCTCCAGCTGAAAATCCACCACCAGAAACAAACCCTCCACCACCAGAAGTGAATTACCAGCCAAGACAGCCAGAATACTCTTCTAGACCTAAGGATGTAGAAGATGTTCAACTGGCATACCAACAACAGCCTGACTATGGTTACAGTCACGGATACGGTTACAATAAAGGTTACAACCCTGGATATAGTGACAAATATATTAGACATCGGAGCAGTCGCCCTGGATCAAGTTTTAGACATGAACCACCACCTCAACCTGTTTATCACGAGCAGTCACCTCAACCGGTTTATCACGAGCTGTCACCTCAAACTGTTTATCATGAACGACCTCGCCCTGTTTATCATGAACCACAATCCAGAAACGTCTACCATGCTGTCTATCATGAACAGCCATCCAGAACTGTCTATCAAGAACCACCATCTAGGACCAGCTACAATGATCATGAGCTTCCATCCAGAAGAGTCTATCAGGATTGTGAGCCACCATCAAGACCTGTCTATCATGAGCATGAGTCACCATCAAGACCTGTCTATCATGATCATGAGCCACAGTCTAGACCCGTCTATCATGAGCCGCAACCACCAACTAGACCAGGTTACTGTGAACCACCATCTAGACCTGTTTACCATGAGCCACCCCCCAGGTCTGTCTATCATGAGCCTCCACGCTCAACTGCTTACCATGAACTACCACCGCAACCTATTTCCCATGAACCACCATCTCAACCTGTTCATGTAACTCATAGTTACAACAGATACAAGCCATCACCTCATATTACAGAGTATGAATATGTACGATCACCACCAAGATACACAGCCTATGGTAGGATGGACCACTACAGTGACTACAGTACGGATCCATATCAGAATGCCAATGCTGGTAATGGGAACGTCACTTCTATGTTCAGCGATGAGAATCCAAATGCATGTACAATAGTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_174933.p1 GENE.R_Transcript_174933~~R_Transcript_174933.p1 ORF type:5prime_partial len:470 (+),score=86.83,HMA|PF00403.22|6.5e-12 R_Transcript_174933:3-1412(+)
LRLLHLPPPFKMGTPLERPWITEINVRMDCNGCVQKIKKALNGINGIYDLYIDFQQQKLIITGWADPERIIKAIKKVRKVATIYSHTEAPDPNSQPTETPPVGEAPPPEPPQEHQEQNAQYQPPAEHPTSEEAPPPEPPREGQPNDQPPPEQPPQNPPAENPPPETNPPPPEVNYQPRQPEYSSRPKDVEDVQLAYQQQPDYGYSHGYGYNKGYNPGYSDKYIRHRSSRPGSSFRHEPPPQPVYHEQSPQPVYHELSPQTVYHERPRPVYHEPQSRNVYHAVYHEQPSRTVYQEPPSRTSYNDHELPSRRVYQDCEPPSRPVYHEHESPSRPVYHDHEPQSRPVYHEPQPPTRPGYCEPPSRPVYHEPPPRSVYHEPPRSTAYHELPPQPISHEPPSQPVHVTHSYNRYKPSPHITEYEYVRSPPRYTAYGRMDHYSDYSTDPYQNANAGNGNVTSMFSDENPNACTIV*

Click here to download the sequence:
Link to NCBI Protein BLAST