Transcript Information: R_Transcript_174954.p1


Annotated TAIR IDAT3G12500.1
Annotated Gene Namebasic chitinase
Annotated Gene Symbol(s)ATHCHIB, PR3, PR-3, CHI-B, B-CHI, HCHIB
Annotation TypeHomolog
Chromosome Positionchr3:3962501-3963984 | Reverse length=335
E-Value2E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.2479878001925
Replicate 30
Condition 2: 8 Hour
Replicate 10.48200521549695
Replicate 20.35213987151473
Replicate 30.64316730544678
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.34468826278579


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_174954.p1 GENE.R_Transcript_174954~~R_Transcript_174954.p1 ORF type:5prime_partial len:254 (+),score=19.90,Chitin_bind_1|PF00187.15|6.3e-14,Chitin_bind_1|PF00187.15|2.9e-11,Chitin_bind_1|PF00187.15|9e-14,Chitin_bind_1|PF00187.15|2.5e-11,Chitin_bind_1|PF00187.15|1.3e-13,Chitin_bind_1|PF00187.15|3.3e+03 R_Transcript_174954:2-763(+)
GTAGAACAACCCCAGCTGCTAATGCCATTATGGCAGAAGCTGAGAGGTCTAGAATGTGGGAAGCAAGCTGGGGGAAAAGTTTGCCCAGATGGTCGCTGCTGTAGCAAGTGGGGGTATTGTGGGGACACCGACGCCCACTGTGGGAGTGGTTGTCAGAGTCAGTGTGACTTTGCAAAGCGATGTGGCAAGGACTTTGGAGGTCGGCTTTGTCCCAACGGTGAGTGTTGTAGCCAGTATGGGTATTTTGGTGGAACAAAAGCCCATTGTGACAAGGGGTGTCAGAGCCAGTGTGGCTATGCAAAGCGATGTGGCAAGGACTTTGGAGGTCGGCTTTGTCCCAATGGCGAGTGTTGTAGCCAGTATGGGTATTGCGGTGTAACAAAAGCCCATTGTGACAAGGGGTGTCAGAGCCAGTGTGGCTACGCAAAGCGATGTGGCAAGGACTTTAGAGGTCGGCTTTGTCCCAACGGCGAGTGTTGTAGCCAGTATGGGTATTGCGGTGTAAGAAAAGCCCATTATGACAAGGGGTGTCAGAGCCAATGTGAGTACGGGCGTTGTGGCAAAGACTTTGGAGGTCGAGTTTGTCCAAATGGGAAGTGTTGCAGCAAGTGGGGGTATTGCGGTGTCACCAAAGCCCACTGTGGGACGGGGTGTCAAAGCCAGTGTGATTACCGCCGCTGTGGGAAAGACTTATGCCCCTCTGCCTCTAACGCTAATGCTCTCCCTGCCAACTTCAACTTCACTGCCACTGCCGCTAGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_174954.p1 GENE.R_Transcript_174954~~R_Transcript_174954.p1 ORF type:5prime_partial len:254 (+),score=19.90,Chitin_bind_1|PF00187.15|6.3e-14,Chitin_bind_1|PF00187.15|2.9e-11,Chitin_bind_1|PF00187.15|9e-14,Chitin_bind_1|PF00187.15|2.5e-11,Chitin_bind_1|PF00187.15|1.3e-13,Chitin_bind_1|PF00187.15|3.3e+03 R_Transcript_174954:2-763(+)
VEQPQLLMPLWQKLRGLECGKQAGGKVCPDGRCCSKWGYCGDTDAHCGSGCQSQCDFAKRCGKDFGGRLCPNGECCSQYGYFGGTKAHCDKGCQSQCGYAKRCGKDFGGRLCPNGECCSQYGYCGVTKAHCDKGCQSQCGYAKRCGKDFRGRLCPNGECCSQYGYCGVRKAHYDKGCQSQCEYGRCGKDFGGRVCPNGKCCSKWGYCGVTKAHCGTGCQSQCDYRRCGKDLCPSASNANALPANFNFTATAAS*

Click here to download the sequence:
Link to NCBI Protein BLAST