Transcript Information: R_Transcript_174964.p1


Annotated TAIR IDAT1G73240.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Nucleoporin protein Ndc1-Nup (InterPro:IPR019049); Has 36 Blast hits to 36 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:27542397-27544668 | Reverse length=519
E-Value7E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.32594573133426
Replicate 20.18746696800266
Replicate 30.20452444282279
Condition 2: 8 Hour
Replicate 10
Replicate 20.79860292289948
Replicate 30.32413590393548
Condition 3: 24 Hour
Replicate 10.61494126502779
Replicate 20.98460977190077
Replicate 30.58627780411332


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_174964.p1 GENE.R_Transcript_174964~~R_Transcript_174964.p1 ORF type:internal len:112 (-),score=17.27 R_Transcript_174964:2-334(-)
GATCTGGAGGAGGTTGGATGGATGGAAGAAGGTCTATTACTCAGGCAGGATTACACTGTTACAATCTTGTCTTTTCAGCGTCCCCCTTTTTATAGCTATAAGATGGGGATTCTTTCAGCTGTCAGACAAGCTATCAAGCTCTCAGTGGTGGCATTCTTGTTCTCGGTCATTTTAGTTGTCCTTTTACCTAATCAGTTTAAAAGTGAAGTTGCAGAGGAATATTTTGCTGAGCAATTCATGTTTTGGTCAGCGAGTTTCACAGTATTCCTATCTTGGGAGCTGATACTTCATTTGCACAAGGTTTTGCATACAAAGAGATTTTTGTTTGCTCCG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_174964.p1 GENE.R_Transcript_174964~~R_Transcript_174964.p1 ORF type:internal len:112 (-),score=17.27 R_Transcript_174964:2-334(-)
DLEEVGWMEEGLLLRQDYTVTILSFQRPPFYSYKMGILSAVRQAIKLSVVAFLFSVILVVLLPNQFKSEVAEEYFAEQFMFWSASFTVFLSWELILHLHKVLHTKRFLFAP

Click here to download the sequence:
Link to NCBI Protein BLAST