Transcript Information: R_Transcript_174973.p1


Annotated TAIR IDAT5G50290.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G17350.1); Has 300 Blast hits to 300 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 300; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:20461814-20463896 | Forward length=303
E-Value1.2E-124
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.6750028985364
Replicate 22.4737020605409
Replicate 32.3696625099468
Condition 2: 8 Hour
Replicate 12.6737438735498
Replicate 23.4697920098391
Replicate 32.5036704303982
Condition 3: 24 Hour
Replicate 12.6388284169775
Replicate 21.8379382408814
Replicate 33.8366378905194


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_174973.p1 GENE.R_Transcript_174973~~R_Transcript_174973.p1 ORF type:5prime_partial len:348 (+),score=21.83,GUB_WAK_bind|PF13947.2|1.1e-15,GUB_WAK_bind|PF13947.2|1.4e+04 R_Transcript_174973:2-1045(+)
CAAAGTATCACATCACTATACAATACTCATTTTCCGTTGTTCCATTCTTCAATTCTCAATTCTCACCAGTTCTTTCTCCTTTCACTTGTCATGAATTCCTTCATAACAGGCACTCTTTTTATAACAATCTTCCCTTCTATTTTGGTATCTCTAGGTTCAAGTTATGGTCACAATAACACATGTAGGTCCTATTGTGGCAATGTCACAATTGACTACCCATTTGGGGTCAAATACGGGTGTGGACATCCGGGTTACTGGGACCTCTTATATTGCATCAATGATGTCCTAATGCTCCATATAAGTTCAGGCTCCTACAGGGTCCTCAACATTGACTATGCTTTCCAAGCCCTCACATTGCATGACCCCCACCTCTCGACCTGCGACTCAATCGTCCTCGGATCACGAGGCAATGGGTTCGTGGTCGAGCCATGGCGGGCCCCGTATTTGAACCCGGCCCCCGAGAACGCCTTCTTGCTAATTGGGTGCTCGGCAAGGTCTTCTCTCTTCCAAGGTTCCAAGCACTTGCCATGCAGGAACATTTCAGGGTTGGGTTGTGAGGATTACTATACTTGTCCTGCTTGGGGGTTTGTTGGGCCAACTCATGTGGGCTTGGTTTATGGATCAGGTCCACCAGAATGTTGTGCGGTTTCTTTTGATGATCTTGGGCCAGCCCAAGGTATAAATCTCACAAAACTTCAATGCCAAGGTTATAGTAGTGCATATAGCCTGGCCCCATTAAAGGTTGATGGGCCACACGAGTGGTCTTATGGAATACGTGTGAGGTACTCGGTGCAAGGACATGATGGGTTTTGTAAATCGTGTGAGGCCACGGGTGGCACGTGTGGGTTTAGTGGTGACGATAGAAGTGGAATTACAGAGCTTTGCTTTTGTGGGACTTGGAATTCTACCTCAAATTGTGATTCCACATCTAATAATAATTCAGTGGAAGACCTGACATCCAGCAGCATTGAGTGGAGAGTCTCAAAAGGTGCCATAGCCTTAGCAGGACTCTTGACTACAGTGGCTATATGGACTAGGCAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_174973.p1 GENE.R_Transcript_174973~~R_Transcript_174973.p1 ORF type:5prime_partial len:348 (+),score=21.83,GUB_WAK_bind|PF13947.2|1.1e-15,GUB_WAK_bind|PF13947.2|1.4e+04 R_Transcript_174973:2-1045(+)
QSITSLYNTHFPLFHSSILNSHQFFLLSLVMNSFITGTLFITIFPSILVSLGSSYGHNNTCRSYCGNVTIDYPFGVKYGCGHPGYWDLLYCINDVLMLHISSGSYRVLNIDYAFQALTLHDPHLSTCDSIVLGSRGNGFVVEPWRAPYLNPAPENAFLLIGCSARSSLFQGSKHLPCRNISGLGCEDYYTCPAWGFVGPTHVGLVYGSGPPECCAVSFDDLGPAQGINLTKLQCQGYSSAYSLAPLKVDGPHEWSYGIRVRYSVQGHDGFCKSCEATGGTCGFSGDDRSGITELCFCGTWNSTSNCDSTSNNNSVEDLTSSSIEWRVSKGAIALAGLLTTVAIWTRQ*

Click here to download the sequence:
Link to NCBI Protein BLAST