Transcript Information: R_Transcript_17498.p1


Annotated TAIR IDAT5G15270.2
Annotated Gene NameRNA-binding KH domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:4958738-4960947 | Forward length=548
E-Value2E-75
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 138.430099345367
Replicate 231.63278642514
Replicate 335.282412812815
Condition 2: 8 Hour
Replicate 133.627732533698
Replicate 235.587523515913
Replicate 342.01712502318
Condition 3: 24 Hour
Replicate 151.192884930883
Replicate 240.493842823988
Replicate 349.319439989949


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_17498.p1 GENE.R_Transcript_17498~~R_Transcript_17498.p1 ORF type:complete len:683 (+),score=144.10,KH_1|PF00013.25|2.7e-14,KH_1|PF00013.25|5.4e-13,KH_1|PF00013.25|7.1e-11,KH_1|PF00013.25|8.4e-12,KH_3|PF13014.2|4.8e-10,KH_3|PF13014.2|4.8e-09,KH_3|PF13014.2|5.9e-10,KH_3|PF13014.2|1.2e-07,KH_2|PF07650.13|0.14,KH_2|PF07650.13|0.28,KH_2|PF07650.13|0.0012,KH_2|PF07650.13|0.051 R_Transcript_17498:223-2271(+)
ATGGAGGGAGACAGAAGGGATGCTTTCAAAAGGAGGTCAAGTACCCAGTTTAAGAAAAAGGGATTGAGTAAGAGGGGTAGATGGGGTAATTTCGGCCCAGAACATCACGAAAACCCTCAGGTTCCTAACCCCTCTGACACTGTATACCGAATACTTTGCCCGTCAAGGAAGATCGGTAGTGTTATTGGAAAAGGTGGAGGCATAATCAAAAACTTGAGAGAAGACACTAGGGCAAAGATTACTGTTTCTGACTCGATTCCAGGCTCAGATGAGCGTGTGATAATGATCTACAGCCCTCCAGATAAAAACCCGAGGAAAGATTCAGATAAGGGGAATGAAGAGGAGTCTATGCTACCGCTTTGTCCGGCACAAGAGGCTCTCTTGAAAGTTCATGACAGGATAATTGAGGAAGATTTGTCTGGAAGACGGGAAGATGACGATGATAATAACATTGTAGTCACTGCTCGTCTTCTGGTTCCTAACAATATGGTAGGATGTCTTCTTGGGAAAGGTGGGGATGTTATTCAGAGATTGAGGAGTGAGACTGGTGCAAGCATTCGCGTACTTCCATCCGAGCATCTGCCAACTTGTGCCCTGAGTACTGATGAACTTGTGCAGCTACAAGGAAAACCAATGGTTCTCAAGAAAGCACTCTATGAAGTTTCCACATTGCTGCATCAGAATCCACGCAAGGAGAAAGCTTTAAATTTTGCCCTGCCTTTCCGAGGACCAGGGTTTCAACCTACTGGTCCTCCTCTAACCAATATGCCACCACCTCACAATCCAATGTGGTCTCCACGTAGTCTTTCTCCGCGCATGCCACCTCCACCTTGGATGGATGACTATAGAAGCCATCCTGGACTTGCGCCAGGTGGATATGATGACGATATCGCTAGACCTGGTCTTGAACCTTCGGGTGAGTTTTCCATGAAAGTTTTGTGCTCAGCCAGCAGGATTGGTGGAGTAATTGGCAAAGGAGGAATCAACGTGAGACAGTTACAACAGGAGACTGGCACAAGCATCCATGTTGAAGATGCATCAGCCTCATCAGAGGAACGTATTATTCGAGTTTCAGCTTTTGAGACGTTGCGAAACCCAAGGTCACAGACTATTGACGCAATTCTTCTGCTTCAAAGTAAAGTGAGTGAGGTATCAGAGAAGGGTATCATTACTACAAGACTTCTTGTTTCCTCTAGTAAGGTTGGATGCCTCCTTGGTCAAGGAGGTTCAATTATCAATGAGATGAGAAGGAGAACTCAGGCAGATATACGCGTTTACTCTAAGGATGAGAAACCTGAGTGTGCTTCAGAAGATGAAGAGCTTGTGCAGGTATCTGGTAGTTTTGTGGTAGCCAAAGATGCTTTGGCAGAAATAGCATCAAGACTAAGGGCAAGATGCTTGAGGGATGCTAATGCTGGAGCGGAACCAGTTCCATTGAGGCCAGTCCAAGGATATGGTCCCAGTGGAAGCTTCCCTCGTGGAGAACCTCCTGTGCCTGGTCCAGTTGGAGTTGGTGCTCCTGATCGTTATGGTACTGTTAAGGGTGGTATGCATGACTATGAACCTCCTAGCTATCCAGTTCATCCAAGTGCCTCTAGATATCCAAATCCTAATAACTCTGTTGAGGTTCGTTACCCAAATCCTGCAGTCAGTCCTCTTCCAGGAGGCATGTATTCAAACTCGCTGGAGGCTCCTGTAACGAGGATGAAACTCCAAGATCCTTACCTTGGTCGCTCAGAAACTATGCTTGATGGACGTGGTGGCTCTGATCACTACAATGCTGCACCAGCTATGCACCATAATTTAGCTGGGAATAATCCCCACCATGGTTATCCAAATCCAAATAGTCAAGGCTCATACCACAACATGAATGGACAAGGCTCGTACCACAGCTTGAGTGCACAGCAAGCATCGTACCAAAGTCCTTATCAGAACGCTCAACAAATTCCTTACCAACAGAACAGCGTCCAACAGAGCCCCTATGGCAACATGAATGCTCAGCATAGTGCCTACCAGAACGTCACAGCACACAGTGCCTACCAATACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_17498.p1 GENE.R_Transcript_17498~~R_Transcript_17498.p1 ORF type:complete len:683 (+),score=144.10,KH_1|PF00013.25|2.7e-14,KH_1|PF00013.25|5.4e-13,KH_1|PF00013.25|7.1e-11,KH_1|PF00013.25|8.4e-12,KH_3|PF13014.2|4.8e-10,KH_3|PF13014.2|4.8e-09,KH_3|PF13014.2|5.9e-10,KH_3|PF13014.2|1.2e-07,KH_2|PF07650.13|0.14,KH_2|PF07650.13|0.28,KH_2|PF07650.13|0.0012,KH_2|PF07650.13|0.051 R_Transcript_17498:223-2271(+)
MEGDRRDAFKRRSSTQFKKKGLSKRGRWGNFGPEHHENPQVPNPSDTVYRILCPSRKIGSVIGKGGGIIKNLREDTRAKITVSDSIPGSDERVIMIYSPPDKNPRKDSDKGNEEESMLPLCPAQEALLKVHDRIIEEDLSGRREDDDDNNIVVTARLLVPNNMVGCLLGKGGDVIQRLRSETGASIRVLPSEHLPTCALSTDELVQLQGKPMVLKKALYEVSTLLHQNPRKEKALNFALPFRGPGFQPTGPPLTNMPPPHNPMWSPRSLSPRMPPPPWMDDYRSHPGLAPGGYDDDIARPGLEPSGEFSMKVLCSASRIGGVIGKGGINVRQLQQETGTSIHVEDASASSEERIIRVSAFETLRNPRSQTIDAILLLQSKVSEVSEKGIITTRLLVSSSKVGCLLGQGGSIINEMRRRTQADIRVYSKDEKPECASEDEELVQVSGSFVVAKDALAEIASRLRARCLRDANAGAEPVPLRPVQGYGPSGSFPRGEPPVPGPVGVGAPDRYGTVKGGMHDYEPPSYPVHPSASRYPNPNNSVEVRYPNPAVSPLPGGMYSNSLEAPVTRMKLQDPYLGRSETMLDGRGGSDHYNAAPAMHHNLAGNNPHHGYPNPNSQGSYHNMNGQGSYHSLSAQQASYQSPYQNAQQIPYQQNSVQQSPYGNMNAQHSAYQNVTAHSAYQY*

Click here to download the sequence:
Link to NCBI Protein BLAST