Transcript Information: R_Transcript_175042.p1


Annotated TAIR ID
Annotated Gene Name
Annotated Gene Symbol(s)
Annotation Type
Chromosome Position
E-Value
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.69361251627931
Replicate 20.33594080666077
Replicate 30.45813475192305
Condition 2: 8 Hour
Replicate 10.68560421852287
Replicate 20.17888705472948
Replicate 30.90758053101935
Condition 3: 24 Hour
Replicate 10.82648106019735
Replicate 20.22055258890577
Replicate 30.56908032185933


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_175042.p1 GENE.R_Transcript_175042~~R_Transcript_175042.p1 ORF type:internal len:500 (+),score=67.82,RVP_2|PF08284.7|4.6e-32,gag-asp_proteas|PF13975.2|2.3e-06,RVT_1|PF00078.23|7.2e-06 R_Transcript_175042:2-1498(+)
GAAGTCAATGGCAAGAACAGGAAGGGTAAGGAAACGGGACAGCATGTGACGGAGGAGAATCCGTCCAAAAGGTTTAGGACTGGGGGAAGCTCACACCATGGGGGTGGAGGCTTCCAAAAAGGTGAAAGGAGAGGAAACAATAATGGTGGAGGAAGAGGAAATGTTCCCTGGAATTGTAGGAAGTGCGGGAAACCATACCACCCAAGGACTAATTGCAAAGGTGAGCTTTGGGATTGTAGGGGTTGTGGTAAAAAGGGCCATAGAGAGTTTGAATGTTGGTCCAACCCACAAAATGTCGGCAATGGGGGTAATAACCGAGGAGTTGGGAACCACCAGGGCAACCGATACAGTGGCAACAACAGGGGAAACCCAGGGCACAACCAGCGCAGCTACAACAACTACAATAGCAACGGTGGTAACGCTGGGAACTACCAGAGGAACAACAACAACCAGCCACAGAACCAGCAGGTTGTGCCCTACCAACAAGCTGGGAATAGTGGGATGAACAACTCCAACATACAAAACAGTCAGTCCAACCCAAACAACAACAGGGGAAGGATCTTTGTGATGAGCCGAGCGGAGGCAGAAAACAATCCCGATGTGGTAGCTGGTACATTTCTTGCCAAATCTATACCTGCATATATTCTTTTTGATTCAGGGGCTTCACATTCTTTTATTTCATCTTCTTTTGTACATAAACACAATTTCATACCAAGTTCTCATTGTGATGCTAACATATCTATGCCTACGGGAATGGTAGTCAACTGTAATCAACTCTTTGAAAATATCCCTATCAATGTAGCCGGGTCGGAATTGCCCGCAAACCTAATACAATTTGATTTGATTGGGTTTGACATCATTTTGGGAATGGATTGGCTTGCCAGACATAGAGCTAAAATTGACTGTAGGCAACAACGGATCTTTTTGAGGGGTCCCAAGGGTAACAAAATTTCTTATTGTGGGTTAGTGATGAAACCGGGGGTGAATCTTATTTCTTTTAAGAGGGGTCAACCAGTTTACCTTTGTCAATCCTTGACCATGGCCCAAGAGCAAAACACCACACCACAAATACCCATTGTTTCAGAATTTCCCGATGTTTTTCCTGAAGATATTGTGGGAATGCCACCCGAAAGAATCATTAGCTTCACAATTGACCTTATACCAGGAGCCTCACCAATTTCTAAGGCACCCTACAGAATGGCACCCACTGAGCTGCAAGAACTCAAACAACAGTTAGATGACCTTTTAGACAAGGGTTTTATCAAACACAGTACATCACCATGGGGAGCGCCAGTTTTGTTTGTGAGAAAGAAAGATGGGAGCATGAGGTTGTGTATAGACTATAGAGAGTTGAATAAAGTCACCATCAAAAACAAATACCCATTACCTAGGATCGAAGATCTTTTTGATCAGCTTCAAGGGGCTGGAGTGTTCTCTAAGATTGATTTACGATCTGGTTACCATCAACTGAGAGTTAGTGAGGTGGATCAACCCAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_175042.p1 GENE.R_Transcript_175042~~R_Transcript_175042.p1 ORF type:internal len:500 (+),score=67.82,RVP_2|PF08284.7|4.6e-32,gag-asp_proteas|PF13975.2|2.3e-06,RVT_1|PF00078.23|7.2e-06 R_Transcript_175042:2-1498(+)
EVNGKNRKGKETGQHVTEENPSKRFRTGGSSHHGGGGFQKGERRGNNNGGGRGNVPWNCRKCGKPYHPRTNCKGELWDCRGCGKKGHREFECWSNPQNVGNGGNNRGVGNHQGNRYSGNNRGNPGHNQRSYNNYNSNGGNAGNYQRNNNNQPQNQQVVPYQQAGNSGMNNSNIQNSQSNPNNNRGRIFVMSRAEAENNPDVVAGTFLAKSIPAYILFDSGASHSFISSSFVHKHNFIPSSHCDANISMPTGMVVNCNQLFENIPINVAGSELPANLIQFDLIGFDIILGMDWLARHRAKIDCRQQRIFLRGPKGNKISYCGLVMKPGVNLISFKRGQPVYLCQSLTMAQEQNTTPQIPIVSEFPDVFPEDIVGMPPERIISFTIDLIPGASPISKAPYRMAPTELQELKQQLDDLLDKGFIKHSTSPWGAPVLFVRKKDGSMRLCIDYRELNKVTIKNKYPLPRIEDLFDQLQGAGVFSKIDLRSGYHQLRVSEVDQPK

Click here to download the sequence:
Link to NCBI Protein BLAST