Transcript Information: R_Transcript_175047.p1


Annotated TAIR ID
Annotated Gene Name
Annotated Gene Symbol(s)
Annotation Type
Chromosome Position
E-Value
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.2226680188357
Replicate 22.2452691196619
Replicate 33.9722666351709
Condition 2: 8 Hour
Replicate 13.7507249774682
Replicate 25.4932802211005
Replicate 35.0362850276218
Condition 3: 24 Hour
Replicate 15.7726278289314
Replicate 24.2708160279442
Replicate 34.8709631817662


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_175047.p1 GENE.R_Transcript_175047~~R_Transcript_175047.p1 ORF type:3prime_partial len:346 (-),score=56.75,Retrotrans_gag|PF03732.13|4.1e-15 R_Transcript_175047:3-1037(-)
ATGGCTGGGGAAACACAAGAGCAAATACTGATCCGTATGAGACAAGTCGAGGAACTCTTAATCTCTCAAAGACAGGGGGGAATCGACTATTACGATAGAATAGTGAGTCTTAACCCACCAATTTTTAGGGGAGGACCCGACCCTACAGATTTAGAATCTTGGATTACTGAGTGGGAAACCATTTTCACTACTACTGAGTGCCCCAAGGAACGCAGAGTCTCACAAATTGACTTCTACCTAAAGGGGGAAGCGGGAATATGGTGGCGACAGAATAAAAATGGTTTGTTAGCTACTGAGGATTTTGATTGGGACATGCTAGTGGAAAAACTAAGAGAGCAATTCTACCCTAGAGCCCTAAGAAGAAAGAAGAAAGCCGAGTTTGAGAACTTGATACAGGGTGAGATGACTGTGTCCGAGTATGCATCCAAATTTATCCAGCTGTCTAGGTTTGCTGAGAACCTGGTTGCGGATGAAAAAGACAAGGTTGAGAGGTTCGAAGATGGCCTCAATTTCAAACTGCAAGAACTTGTAACTGGTCAATGCCAGACTTTTTCGGAAGTCTTGGATAAGGCCATTAACATGGAGAGAGTGCTTGAGAGGCGTAGGGAAGTTAGTGGCAAGAACAGGAAGGGTAAGGAAACGGGACAGCATGTGACGGAGGAGAATCCGTCCAAAAGATTTAGGATTGGGGGAAGCTCACACCATGGGGGTGGAGGCTTCCAAAGAGGTGATAGGAGAGGCAATAATAATGGTGGAGGAAGAGGAAATGGCTCTTCAAACTGTAGGAAATGTGGGAAACCATACCATCCTAGAACAAACTGCAAGGGTGAGCTTTGGGATTGTAGAAGCTGTGGTAAGAAAGGCCATAGGGATTTTGAGTGTTGGAGTAACCCACAGAATGTTGGTAATAGGAGTAATAACCGAGGAGCTAGGAACCACCAAGGTAACAGATACAATGGCAACCATAGGGGAAACCAAGGACAGGACCAGCGAAGTTATAACAACTACAACCAGCCACAGAACCAGCAGGCTGTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_175047.p1 GENE.R_Transcript_175047~~R_Transcript_175047.p1 ORF type:3prime_partial len:346 (-),score=56.75,Retrotrans_gag|PF03732.13|4.1e-15 R_Transcript_175047:3-1037(-)
MAGETQEQILIRMRQVEELLISQRQGGIDYYDRIVSLNPPIFRGGPDPTDLESWITEWETIFTTTECPKERRVSQIDFYLKGEAGIWWRQNKNGLLATEDFDWDMLVEKLREQFYPRALRRKKKAEFENLIQGEMTVSEYASKFIQLSRFAENLVADEKDKVERFEDGLNFKLQELVTGQCQTFSEVLDKAINMERVLERRREVSGKNRKGKETGQHVTEENPSKRFRIGGSSHHGGGGFQRGDRRGNNNGGGRGNGSSNCRKCGKPYHPRTNCKGELWDCRSCGKKGHRDFECWSNPQNVGNRSNNRGARNHQGNRYNGNHRGNQGQDQRSYNNYNQPQNQQAV

Click here to download the sequence:
Link to NCBI Protein BLAST